RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 ZXDCQ2QGD7 858 aaPredicted RBP9.63□□□□□ -0.87
TCOF1-204ENST00000427724 SPIN3Q5JUX0 258 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.63□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF425Q6IV72 752 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF227Q86WZ6 799 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 LRRC56Q8IYG6 542 aaPredicted RBP9.63□□□□□ -0.87
TCOF1-204ENST00000427724 OR4M1Q8NGD0 313 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 THAP6Q8TBB0 222 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 PAPOLGQ9BWT3 736 aaKnown RBP9.63□□□□□ -0.87
TCOF1-204ENST00000427724 EGLN1Q9GZT9 426 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF442Q9H7R0 627 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 FAM230AA0A1W2PPH8 454 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 SYT7O43581 403 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 FZD7O75084 574 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 DBHP09172 617 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 MAPK3P27361 379 aaPredicted RBP9.63□□□□□ -0.87
TCOF1-204ENST00000427724 RAB5BP61020 215 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 FOXF1Q12946 379 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 MAML2Q8IZL2 1156 aaPredicted RBP9.63□□□□□ -0.87
TCOF1-204ENST00000427724 OR5T2Q8NGG2 359 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 SMAP2Q8WU79 429 aaPredicted RBP9.63□□□□□ -0.87
TCOF1-204ENST00000427724 OR2S2Q9NQN1 319 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 POLE3Q9NRF9 147 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 ASF1BQ9NVP2 202 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 DHDHQ9UQ10 334 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 RCE1Q9Y256 329 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 A0A1B0GTH9 108 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 C13orf42A0A1B0GVH6 325 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 WRBO00258 174 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 VAMP5O95183 116 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 CELA2AP08217 269 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 GABRA1P14867 456 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 RAB3AP20336 220 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 RFX2P48378 723 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 CLDN12P56749 244 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 C5orf46Q6UWT4 87 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 GLB1L2Q8IW92 636 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 FOXRED2Q8IWF2 684 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 SPACA3Q8IXA5 215 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 CASTOR1Q8WTX7 329 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 ADAMTS14Q8WXS8 1223 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 GHSRQ92847 366 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 PDCD11Q14690 1871 aaKnown RBP9.63□□□□□ -0.87
TCOF1-204ENST00000427724 FRG2CA6NGY1 282 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 ELK1P19419 428 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 CRYBB2P43320 205 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 DSCR4P56555 118 aaPredicted RBP9.62□□□□□ -0.87
TCOF1-204ENST00000427724 ACTA2P62736 377 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 ACTG2P63267 376 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 FGL1Q08830 312 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 PMPCAQ10713 525 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 INSL4Q14641 139 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 AGERQ15109 404 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 BEX5Q5H9J7 111 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 METTL11BQ5VVY1 283 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 SFXN4Q6P4A7 337 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 MBOAT2Q6ZWT7 520 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 SLC43A2Q8N370 569 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 STOML3Q8TAV4 291 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 OR10A2Q9H208 303 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 BIN3Q9NQY0 253 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 REV1Q9UBZ9 1251 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 DOCK9Q9BZ29 2069 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 TUBAL3A6NHL2 446 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 PRSS44E7EML9 344 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 GOSR2O14653 212 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 RBBP9O75884 186 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 LALBAP00709 142 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 FAM157BP0CG42 384 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 IFNGR1P15260 489 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 HTR2AP28223 471 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 HTR1FP30939 366 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 IGSF11Q5DX21 431 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 GPR139Q6DWJ6 353 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 OR7E24Q6IFN5 339 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF322Q6U7Q0 402 aaPredicted RBP9.62□□□□□ -0.87
TCOF1-204ENST00000427724 METAP1DQ6UB28 335 aaPredicted RBP9.62□□□□□ -0.87
TCOF1-204ENST00000427724 SYT9Q86SS6 491 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 SIAH3Q8IW03 269 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 RDH10Q8IZV5 341 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 PRSS33Q8NF86 280 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 OR4C3Q8NH37 302 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 GPR119Q8TDV5 335 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 CHAC2Q8WUX2 184 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 H1FXQ92522 213 aaKnown RBP9.62□□□□□ -0.87
TCOF1-204ENST00000427724 FCRL1Q96LA6 429 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 LMF1Q96S06 567 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 TRAF4Q9BUZ4 470 aaPredicted RBP9.62□□□□□ -0.87
TCOF1-204ENST00000427724 SYNPO2LQ9H987 977 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 EMC7Q9NPA0 242 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 GPATCH2Q9NW75 528 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 PTTG3PQ9NZH4 202 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 A4GNTQ9UNA3 340 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 KCNE3Q9Y6H6 103 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 RGS11O94810 467 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 GTF2F2P13984 249 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 NID1P14543 1247 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 VEGFCP49767 419 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF83P51522 516 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 MAP2K6P52564 334 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms