RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 KLF14Q8TD94 323 aaPredicted RBP15.74■□□□□ 0.11
GPC1-205ENST00000427506 IPCEF1Q8WWN9 437 aaPredicted RBP15.74■□□□□ 0.11
GPC1-205ENST00000427506 MARS2Q96GW9 593 aaKnown RBP15.74■□□□□ 0.11
GPC1-205ENST00000427506 ERMAPQ96PL5 475 aaPredicted RBP15.74■□□□□ 0.11
GPC1-205ENST00000427506 CCT8L2Q96SF2 557 aa15.74■□□□□ 0.11
GPC1-205ENST00000427506 GPA33Q99795 319 aa15.74■□□□□ 0.11
GPC1-205ENST00000427506 VSX1Q9NZR4 365 aaPredicted RBP15.74■□□□□ 0.11
GPC1-205ENST00000427506 YLPM1P49750 1951 aaKnown RBP15.74■□□□□ 0.11
GPC1-205ENST00000427506 B2RBV5 119 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 IMPA2O14732 288 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 SGCEO43556 437 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 ABHD16AO95870 558 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 NGFP01138 241 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 SLC6A6P31641 620 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 HTR5AP47898 357 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 TEKQ02763 1124 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 AQP6Q13520 282 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 TSTQ16762 297 aaKnown RBP15.73■□□□□ 0.11
GPC1-205ENST00000427506 RFX4Q33E94 735 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 FAM120AOSQ5T036 256 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 OTPQ5XKR4 325 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 DNM1P34Q6PK57 102 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 CYP2R1Q6VVX0 501 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 PTCHD4Q6ZW05 846 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 JAZF1Q86VZ6 243 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 FITM2Q8N6M3 262 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 LINC01356Q8N9X3 169 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 GTF3AQ92664 365 aaKnown RBP15.73■□□□□ 0.11
GPC1-205ENST00000427506 NSL1Q96IY1 281 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 NUAK2Q9H093 628 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 OR52D1Q9H346 318 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 IL1RAPQ9NPH3 570 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 NKIRAS2Q9NYR9 191 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 PLEK2Q9NYT0 353 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 POLR1DQ9Y2S0 133 aa15.73■□□□□ 0.11
GPC1-205ENST00000427506 SPRY3O43610 288 aa15.72■□□□□ 0.11
GPC1-205ENST00000427506 MPZL1O95297 269 aa15.72■□□□□ 0.11
GPC1-205ENST00000427506 TXNDC12O95881 172 aa15.72■□□□□ 0.11
GPC1-205ENST00000427506 COX5BP10606 129 aa15.72■□□□□ 0.11
GPC1-205ENST00000427506 SRD5A1P18405 259 aa15.72■□□□□ 0.11
GPC1-205ENST00000427506 NOS3P29474 1203 aa15.72■□□□□ 0.11
GPC1-205ENST00000427506 CDKN2AP42771 156 aaKnown RBP15.72■□□□□ 0.11
GPC1-205ENST00000427506 MBNL2Q5VZF2 373 aaKnown RBP15.72■□□□□ 0.11
GPC1-205ENST00000427506 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.72■□□□□ 0.11
GPC1-205ENST00000427506 CLDND2Q8NHS1 167 aa15.72■□□□□ 0.11
GPC1-205ENST00000427506 IFT27Q9BW83 186 aa15.72■□□□□ 0.11
GPC1-205ENST00000427506 SAP30LQ9HAJ7 183 aa15.72■□□□□ 0.11
GPC1-205ENST00000427506 ASH2LQ9UBL3 628 aa15.72■□□□□ 0.11
GPC1-205ENST00000427506 RTTNQ86VV8 2226 aa15.72■□□□□ 0.11
GPC1-205ENST00000427506 IGHV1-69-2A0A0G2JMI3 117 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 RENP00797 406 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 FPR3P25089 353 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 CRABP1P29762 137 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 CDH15P55291 814 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 LSM6P62312 80 aaKnown RBP15.71■□□□□ 0.11
GPC1-205ENST00000427506 CR1LQ2VPA4 569 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 LEG1Q6P5S2 330 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 USP51Q70EK9 711 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 VASH1Q7L8A9 365 aaPredicted RBP15.71■□□□□ 0.11
GPC1-205ENST00000427506 GNPDA2Q8TDQ7 276 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 SAMD8Q96LT4 415 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 TSSK2Q96PF2 358 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 SRA1Q9HD15 236 aaKnown RBP15.71■□□□□ 0.11
GPC1-205ENST00000427506 CYSLTR2Q9NS75 346 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 ACTR3BQ9P1U1 418 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 GRIP1Q9Y3R0 1128 aa15.71■□□□□ 0.11
GPC1-205ENST00000427506 H3BSA7 217 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 TIMM8AO60220 97 aaPredicted RBP15.7■□□□□ 0.1
GPC1-205ENST00000427506 ICMTO60725 284 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 RP2O75695 350 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 GSTM3P21266 225 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 LIPAP38571 399 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 CRYBB2P43320 205 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 MMP15P51511 669 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 HFEQ30201 348 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 C1orf94Q6P1W5 598 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 CCDC197Q8NCU1 140 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 NPEPL1Q8NDH3 523 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 NMNAT3Q96T66 252 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 TBCCD1Q9NVR7 557 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 TREM2Q9NZC2 230 aa15.7■□□□□ 0.1
GPC1-205ENST00000427506 CGGBP1Q9UFW8 167 aaPredicted RBP15.7■□□□□ 0.1
GPC1-205ENST00000427506 B4DSR2 109 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 TNFRSF11BO00300 401 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 KRT36O76013 467 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 GPANK1O95872 356 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 FAM107AO95990 144 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 IGHV1-46P01743 117 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 ATP6V1B2P21281 511 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 GSSP48637 474 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 MVKQ03426 396 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 TSPAN31Q12999 210 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 ZMAT1Q5H9K5 638 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 MTX3Q5HYI7 312 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 FAM209AQ5JX71 171 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 AVPI1Q5T686 147 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 PGM2L1Q6PCE3 622 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 CXXC5Q7LFL8 322 aaKnown RBP15.69■□□□□ 0.1
GPC1-205ENST00000427506 ARHGAP24Q8N264 748 aa15.69■□□□□ 0.1
GPC1-205ENST00000427506 OR4K13Q8NH42 304 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms