RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 TSPAN2O60636 221 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 GLSO94925 669 aaPredicted RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 KDM4BO94953 1096 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 MPZL1O95297 269 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 WNT11O96014 354 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 RLN1P04808 185 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 POU3F4P49335 361 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 POLR2HP52434 150 aaKnown RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 DCAF7P61962 342 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 TSPAN5P62079 268 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 POLR2GP62487 172 aaKnown RBP eCLIP9.58□□□□□ -0.88
CUX1-205ENST00000425244 INSM1Q01101 510 aaPredicted RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 SLC17A1Q14916 467 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 POU4F3Q15319 338 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 SGCBQ16585 318 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 SLC18B1Q6NT16 456 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 HGDQ93099 445 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 OR8B4Q96RC9 309 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 CMKLR1Q99788 373 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 CLEC4MQ9H2X3 399 aaPredicted RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 CNTRLQ7Z7A1 2325 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 FREM3P0C091 2139 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 A0A1B0GUH1 482 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 PHYHO14832 338 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 EIF4E2O60573 245 aaKnown RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 PRAF2O60831 178 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 AHSA1O95433 338 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 TGM6O95932 706 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 PNPP00491 289 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 IL11P20809 199 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 DCDP81605 110 aaKnown RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 MRPS10P82664 201 aaKnown RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 ZFP36L1Q07352 338 aaKnown RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 MFGE8Q08431 387 aaPredicted RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 EIF2B1Q14232 305 aaKnown RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 ELFN2Q5R3F8 820 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 COX15Q7KZN9 410 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 NDUFAF7Q7L592 441 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 ADGRG3Q86Y34 549 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 OR52B4Q8NGK2 314 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 OR1N1Q8NGS0 311 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 OR8S1Q8NH09 359 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 MNTQ99583 582 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 DIABLOQ9NR28 239 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 CA10Q9NS85 328 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 MRPL22Q9NWU5 206 aaKnown RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 SLC39A1Q9NY26 324 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 PTTG3PQ9NZH4 202 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 ELF5Q9UKW6 265 aaPredicted RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 PPIEQ9UNP9 301 aaKnown RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 SPTBN2O15020 2390 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 RBBP9O75884 186 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 GP1BAP07359 652 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 ITGA5P08648 1049 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 HLA-DOBP13765 273 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 RAB11BQ15907 218 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 GPR119Q8TDV5 335 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 OIT3Q8WWZ8 545 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 B3GNT2Q9NY97 397 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 MYEF2Q9P2K5 600 aaKnown RBP9.57□□□□□ -0.88
CUX1-205ENST00000425244 DHDHQ9UQ10 334 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 B3GALT1Q9Y5Z6 326 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 GGT3PA6NGU5 568 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 A8MVM7 634 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 XRCC3O43542 346 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 CREBL2O60519 120 aaPredicted RBP9.57□□□□□ -0.88
CUX1-205ENST00000425244 CTAG2O75638 210 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 MT-ATP6P00846 226 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 HEXBP07686 556 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 COL28A1Q2UY09 1125 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 OLFML2AQ68BL7 652 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 GLDNQ6ZMI3 551 aaPredicted RBP9.57□□□□□ -0.88
CUX1-205ENST00000425244 ZNF679Q8IYX0 411 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 GALNT11Q8NCW6 608 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 OR4D10Q8NGI6 311 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 MR1Q95460 341 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 MCHR2Q969V1 340 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 C8orf44Q96CB5 159 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 NPAS1Q99742 590 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 GINS4Q9BRT9 223 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 ATG5Q9H1Y0 275 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 TXNIPQ9H3M7 391 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 HEXA-AS1Q9H8Q6 139 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 PISDQ9UG56 409 aa9.57□□□□□ -0.88
CUX1-205ENST00000425244 COA3Q9Y2R0 106 aaPredicted RBP9.57□□□□□ -0.88
CUX1-205ENST00000425244 SLC22A23A1A5C7 686 aa9.56□□□□□ -0.88
CUX1-205ENST00000425244 LEUTXA8MZ59 168 aa9.56□□□□□ -0.88
CUX1-205ENST00000425244 PYCARD-AS1I3L0S3 204 aa9.56□□□□□ -0.88
CUX1-205ENST00000425244 MPC2O95563 127 aa9.56□□□□□ -0.88
CUX1-205ENST00000425244 HRGP04196 525 aa9.56□□□□□ -0.88
CUX1-205ENST00000425244 GTF2F2P13984 249 aa9.56□□□□□ -0.88
CUX1-205ENST00000425244 PSMA6P60900 246 aaKnown RBP9.56□□□□□ -0.88
CUX1-205ENST00000425244 UBE2MP61081 183 aaKnown RBP9.56□□□□□ -0.88
CUX1-205ENST00000425244 OC90Q02509 493 aaPredicted RBP9.56□□□□□ -0.88
CUX1-205ENST00000425244 FMODQ06828 376 aa9.56□□□□□ -0.88
CUX1-205ENST00000425244 GRINAQ7Z429 371 aa9.56□□□□□ -0.88
CUX1-205ENST00000425244 LINC00346Q8IVM7 164 aa9.56□□□□□ -0.88
CUX1-205ENST00000425244 LINC00518Q8N0U6 118 aa9.56□□□□□ -0.88
CUX1-205ENST00000425244 OR4C16Q8NGL9 310 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms