RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.87■□□□□ 0.45
PMS1-211ENST00000424766 OR4F15Q8NGB8 312 aa17.87■□□□□ 0.45
PMS1-211ENST00000424766 LILRB1Q8NHL6 650 aaPredicted RBP17.87■□□□□ 0.45
PMS1-211ENST00000424766 FAM81AQ8TBF8 368 aa17.87■□□□□ 0.45
PMS1-211ENST00000424766 PLEKHF2Q9H8W4 249 aa17.87■□□□□ 0.45
PMS1-211ENST00000424766 WDR76Q9H967 626 aa17.87■□□□□ 0.45
PMS1-211ENST00000424766 IMPAD1Q9NX62 359 aa17.87■□□□□ 0.45
PMS1-211ENST00000424766 COMMD3-BMI1R4GMX3 469 aa17.87■□□□□ 0.45
PMS1-211ENST00000424766 RAI1Q7Z5J4 1906 aaPredicted RBP17.86■□□□□ 0.45
PMS1-211ENST00000424766 ZNF593O00488 134 aaPredicted RBP17.86■□□□□ 0.45
PMS1-211ENST00000424766 ATP6V1G2O95670 118 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 APEX1P27695 318 aaKnown RBP17.86■□□□□ 0.45
PMS1-211ENST00000424766 CALCRP30988 508 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 APLNRP35414 380 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 ENTPD1P49961 510 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 SNRPGP62308 76 aaKnown RBP17.86■□□□□ 0.45
PMS1-211ENST00000424766 SPOCK1Q08629 439 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 KEAP1Q14145 624 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 ZNF672Q499Z4 452 aaPredicted RBP17.86■□□□□ 0.45
PMS1-211ENST00000424766 SLC25A30Q5SVS4 291 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 SLC18B1Q6NT16 456 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 ZNF774Q6NX45 483 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 LYPD4Q6UWN0 246 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 MEPCEQ7L2J0 689 aaKnown RBP17.86■□□□□ 0.45
PMS1-211ENST00000424766 SLC30A7Q8NEW0 376 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 KBTBD8Q8NFY9 601 aa17.86■□□□□ 0.45
PMS1-211ENST00000424766 DCHS2Q6V1P9 2916 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 RER1O15258 196 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 ROS1P08922 2347 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 STOMP27105 288 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 KRTAP10-9P60411 292 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 RPS7P62081 194 aaKnown RBP17.85■□□□□ 0.45
PMS1-211ENST00000424766 TBC1D28Q2M2D7 210 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 CCDC92Q53HC0 331 aaPredicted RBP17.85■□□□□ 0.45
PMS1-211ENST00000424766 LCN1P1Q5VSP4 162 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 TTC23Q5W5X9 447 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 CORO6Q6QEF8 472 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 VASH1Q7L8A9 365 aaPredicted RBP17.85■□□□□ 0.45
PMS1-211ENST00000424766 SHFQ7M4L6 423 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 LINC00346Q8IVM7 164 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 GID4Q8IVV7 300 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 TIGD4Q8IY51 512 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 DHRSXQ8N5I4 330 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 NRG4Q8WWG1 115 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 AKAP1Q92667 903 aaKnown RBP eCLIP17.85■□□□□ 0.45
PMS1-211ENST00000424766 UBE2FQ969M7 185 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 ZMYND19Q96E35 227 aaPredicted RBP17.85■□□□□ 0.45
PMS1-211ENST00000424766 POM121L2Q96KW2 1035 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 INTS14Q96SY0 518 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 PLEK2Q9NYT0 353 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 ATPIF1Q9UII2 106 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 GDF2Q9UK05 429 aaPredicted RBP17.85■□□□□ 0.45
PMS1-211ENST00000424766 POU2F3Q9UKI9 436 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 SPEF1Q9Y4P9 236 aa17.85■□□□□ 0.45
PMS1-211ENST00000424766 CENPEQ02224 2701 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 CCDC182A6NF36 153 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 SLC22A31A6NKX4 558 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 ATP6V1G2-DDX39BF2Z307 99 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 H0YJX3 145 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 HS3ST1O14792 307 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 SYNGR3O43761 229 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 MPZL2O60487 215 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 DOK2O60496 412 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 GDI2P50395 445 aaKnown RBP17.84■□□□□ 0.45
PMS1-211ENST00000424766 CDH11P55287 796 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 RAB35Q15286 201 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 ELFN2Q5R3F8 820 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 BCDIN3DQ7Z5W3 292 aaKnown RBP17.84■□□□□ 0.45
PMS1-211ENST00000424766 ERI1Q8IV48 349 aaKnown RBP17.84■□□□□ 0.45
PMS1-211ENST00000424766 OR1F12Q8NHA8 337 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 VCX3BQ9H321 246 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 CDH20Q9HBT6 801 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 HAO2Q9NYQ3 351 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 CISD1Q9NZ45 108 aaKnown RBP17.84■□□□□ 0.45
PMS1-211ENST00000424766 ATP23Q9Y6H3 246 aa17.84■□□□□ 0.45
PMS1-211ENST00000424766 PLCE1Q9P212 2302 aa17.83■□□□□ 0.45
PMS1-211ENST00000424766 DSCAMO60469 2012 aa17.83■□□□□ 0.45
PMS1-211ENST00000424766 FLNBO75369 2602 aaKnown RBP17.83■□□□□ 0.44
PMS1-211ENST00000424766 LOC100509620A0A075B734 347 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 OR6C6A6NF89 314 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 NR4A1P22736 598 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 PCSK6P29122 969 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 ADARB1P78563 741 aaKnown RBP17.83■□□□□ 0.44
PMS1-211ENST00000424766 HGFACQ04756 655 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 TMED1Q13445 227 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 OCLNQ16625 522 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 MEDAGQ5VYS4 303 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 ZNF611Q8N823 705 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 NUP37Q8NFH4 326 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 OR6N2Q8NGY6 317 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 RHOXF1Q8NHV9 184 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 NEUROG1Q92886 237 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 RFKQ969G6 155 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 ZNF582Q96NG8 517 aaPredicted RBP17.83■□□□□ 0.44
PMS1-211ENST00000424766 HDHD2Q9H0R4 259 aa17.83■□□□□ 0.44
PMS1-211ENST00000424766 WARS2Q9UGM6 360 aaKnown RBP17.83■□□□□ 0.44
PMS1-211ENST00000424766 E7EQL1 145 aa17.82■□□□□ 0.44
PMS1-211ENST00000424766 H0YAE9 185 aa17.82■□□□□ 0.44
PMS1-211ENST00000424766 SPARCP09486 303 aa17.82■□□□□ 0.44
PMS1-211ENST00000424766 CCL2P13500 99 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms