RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CYB5R1Q9UHQ9 305 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 EXOGQ9Y2C4 368 aaKnown RBP11.75□□□□□ -0.53
PRPF39-202ENST00000424478 EFCAB10A6NFE3 127 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 SNTNA6NMZ2 147 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF133P52736 654 aaPredicted RBP11.75□□□□□ -0.53
PRPF39-202ENST00000424478 EMX1Q04741 257 aaPredicted RBP11.75□□□□□ -0.53
PRPF39-202ENST00000424478 GGTLC2Q14390 218 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 TBRG1Q3YBR2 411 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 SLC18B1Q6NT16 456 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 ACBD7Q8N6N7 88 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 OTOSQ8NHW6 89 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 ALG8Q9BVK2 526 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 OR51B6Q9H340 312 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 ACOXLQ9NUZ1 547 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 MRPS34P82930 218 aaKnown RBP11.75□□□□□ -0.53
PRPF39-202ENST00000424478 MED22Q15528 200 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 CA5BP1Q8WTZ4 195 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 C4orf36Q96KX1 117 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 NR1H4Q96RI1 486 aaPredicted RBP11.75□□□□□ -0.53
PRPF39-202ENST00000424478 RNF121Q9H920 327 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 SIAEQ9HAT2 523 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF629Q9UEG4 869 aaPredicted RBP11.75□□□□□ -0.53
PRPF39-202ENST00000424478 GNG8Q9UK08 70 aa11.75□□□□□ -0.53
PRPF39-202ENST00000424478 C5orf63A6NC05 138 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 AHCYL1O43865 530 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 INMTO95050 263 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 CD8BP10966 210 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 ALOX5APP20292 161 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 CCNOP22674 350 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 PRKXP51817 358 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 GABRA6Q16445 453 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 KLHL22Q53GT1 634 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF322Q6U7Q0 402 aaPredicted RBP11.74□□□□□ -0.53
PRPF39-202ENST00000424478 KCTD8Q6ZWB6 473 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 MRGPRGQ86SM5 289 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 ST7LQ8TDW4 575 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 SPRYD4Q8WW59 207 aaPredicted RBP11.74□□□□□ -0.53
PRPF39-202ENST00000424478 BCL2L2Q92843 193 aaPredicted RBP11.74□□□□□ -0.53
PRPF39-202ENST00000424478 TMIGD2Q96BF3 282 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 HAO2Q9NYQ3 351 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 PSG4Q00888 419 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 MYDGFQ969H8 173 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 SIGLEC11Q96RL6 698 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF696Q9H7X3 374 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 PLEK2Q9NYT0 353 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 COQ3Q9NZJ6 369 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 BLOC1S6Q9UL45 172 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 GTF2A1LQ9UNN4 478 aa11.74□□□□□ -0.53
PRPF39-202ENST00000424478 DIMT1Q9UNQ2 313 aaKnown RBP11.74□□□□□ -0.53
PRPF39-202ENST00000424478 RPL36A-HNRNPH2H7BZ11 118 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 APEX1P27695 318 aaKnown RBP11.73□□□□□ -0.53
PRPF39-202ENST00000424478 KCTD21Q4G0X4 260 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 FAM27BQ5VT28 67 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 TMEM211Q6ICI0 200 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 MDP1Q86V88 176 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 KLBQ86Z14 1044 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 CPEB3Q8NE35 698 aaKnown RBP11.73□□□□□ -0.53
PRPF39-202ENST00000424478 SNX33Q8WV41 574 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 SLAMF6Q96DU3 332 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 ZFP3Q96NJ6 502 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 FGF20Q9NP95 211 aaPredicted RBP11.73□□□□□ -0.53
PRPF39-202ENST00000424478 CNOT2Q9NZN8 540 aaKnown RBP11.73□□□□□ -0.53
PRPF39-202ENST00000424478 PLCE1Q9P212 2302 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 CENPBD1B2RD01 187 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 IGHA1P01876 353 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 CRHP06850 196 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 MYL12AP19105 171 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 RAB39AQ14964 217 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 PABPC1L2AQ5JQF8 200 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 ZNF773Q6PK81 442 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 BEND4Q6ZU67 534 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 BHLHA15Q7RTS1 189 aaPredicted RBP11.73□□□□□ -0.53
PRPF39-202ENST00000424478 OR2AJ1Q8NGZ0 328 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 FNDC8Q8TC99 324 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 MARCH7Q9H992 704 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 MRPS18AQ9NVS2 196 aaKnown RBP11.73□□□□□ -0.53
PRPF39-202ENST00000424478 MRM2Q9UI43 246 aaKnown RBP11.73□□□□□ -0.53
PRPF39-202ENST00000424478 AKAP6Q13023 2319 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 MSTNO14793 375 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 NR2C1P13056 603 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 COX5AP20674 150 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 IL32P24001 234 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 DCKP27707 260 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 RAB1AP62820 205 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 CCDC92Q53HC0 331 aaPredicted RBP11.73□□□□□ -0.53
PRPF39-202ENST00000424478 FOXL2NBQ6ZUU3 175 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 ACTR6Q9GZN1 396 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 SNX5Q9Y5X3 404 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 SIRT4Q9Y6E7 314 aaPredicted RBP11.73□□□□□ -0.53
PRPF39-202ENST00000424478 PKDREJQ9NTG1 2253 aa11.73□□□□□ -0.53
PRPF39-202ENST00000424478 MAGEA13PA6NCF6 341 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 F5H5K5 113 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 IDH3GP51553 393 aaPredicted RBP11.72□□□□□ -0.53
PRPF39-202ENST00000424478 HGFACQ04756 655 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 C4orf17Q53FE4 359 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 ANKRD16Q6P6B7 361 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 PRSS48Q7RTY5 328 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 WNT5BQ9H1J7 359 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 ELOVL3Q9HB03 270 aa11.72□□□□□ -0.53
PRPF39-202ENST00000424478 ACOT13Q9NPJ3 140 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms