RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 PADI1Q9ULC6 663 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 FAM96BQ9Y3D0 163 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 IGHV1OR21-1A0A087WYE8 117 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 A0A0A6YYC8 382 aaPredicted RBP8.92□□□□□ -0.98
USP54-205ENST00000424265 A0A1W2PR77 199 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 I3L1I5 382 aaPredicted RBP8.92□□□□□ -0.98
USP54-205ENST00000424265 SYT5O00445 386 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 HPXP02790 462 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 GBAP04062 536 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 SBK3P0C264 359 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 RPL4P36578 427 aaKnown RBP8.92□□□□□ -0.98
USP54-205ENST00000424265 COL5A1-AS1Q5SY13 56 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 OGFOD3Q6PK18 319 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 ZNF550Q7Z398 422 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 SLC5A8Q8N695 610 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 KRTCAP2Q8N6L1 136 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 ZNF563Q8TA94 476 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 FCAMRQ8WWV6 532 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 ARV1Q9H2C2 271 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 RCE1Q9Y256 329 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 TRPM6Q9BX84 2022 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 ANKRD61A6NGH8 418 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 STATHP02808 62 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 PCBP4P57723 403 aaKnown RBP8.91□□□□□ -0.98
USP54-205ENST00000424265 UBE2KP61086 200 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 OAFQ86UD1 273 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 GABRG1Q8N1C3 465 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 PLPP5Q8NEB5 264 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 ZNF596Q8TC21 504 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 ALKBH7Q9BT30 221 aaPredicted RBP8.91□□□□□ -0.98
USP54-205ENST00000424265 CTNSO60931 367 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 NHLH1Q02575 133 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 TMEM244Q5VVB8 128 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 Q6ZSR9 355 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 Q6ZTK2 550 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 C6orf120Q7Z4R8 191 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 TMEM156Q8N614 296 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 FRMD1Q8N878 549 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 OR4K1Q8NGD4 311 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 MRGPRDQ8TDS7 321 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 MS4A6EQ96DS6 147 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 AKR1E2Q96JD6 320 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 OR8D2Q9GZM6 311 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 SYT4Q9H2B2 425 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 SEPSECSQ9HD40 501 aaKnown RBP8.91□□□□□ -0.98
USP54-205ENST00000424265 OPN4Q9UHM6 478 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 WDR45Q9Y484 360 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 KIAA1671Q9BY89 1806 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 DOCK4Q8N1I0 1966 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 TPST2O60704 377 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 MAOAP21397 527 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 GABRA5P31644 462 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 CD80P33681 288 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 DHODHQ02127 395 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 EGR3Q06889 387 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 VEZF1Q14119 521 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 NHLRC1Q6VVB1 395 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 MEX3BQ6ZN04 569 aaKnown RBP8.91□□□□□ -0.98
USP54-205ENST00000424265 ZNF836Q6ZNA1 936 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 MOB3CQ70IA8 216 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 OR6C1Q96RD1 312 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 MYOTQ9UBF9 498 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 TCFL5Q9UL49 500 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 CHD5Q8TDI0 1954 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 CYB5BO43169 146 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 GIMD1P0DJR0 217 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 EPXP11678 715 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 CPMP14384 443 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 CHATP28329 748 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 AWAT1Q58HT5 328 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 OR4F15Q8NGB8 312 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 MFSD8Q8NHS3 518 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 BPIFA2Q96DR5 249 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 KCNJ16Q9NPI9 418 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 TVP23BQ9NYZ1 205 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 R4GN57 208 aa8.91□□□□□ -0.98
USP54-205ENST00000424265 SCN2BO60939 215 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 SLC35E2P0CK97 266 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 LAMP1P11279 417 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 PIPP12273 146 aaPredicted RBP8.9□□□□□ -0.98
USP54-205ENST00000424265 DAOP14920 347 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 SUCLG1P53597 346 aaKnown RBP8.9□□□□□ -0.98
USP54-205ENST00000424265 RRADP55042 308 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 SIM1P81133 766 aaPredicted RBP8.9□□□□□ -0.98
USP54-205ENST00000424265 LASP1Q14847 261 aaKnown RBP8.9□□□□□ -0.98
USP54-205ENST00000424265 ELAVL1Q15717 326 aaKnown RBP8.9□□□□□ -0.98
USP54-205ENST00000424265 APOOLQ6UXV4 268 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 GLDNQ6ZMI3 551 aaPredicted RBP8.9□□□□□ -0.98
USP54-205ENST00000424265 OR5M1Q8NGP8 315 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 OR1N1Q8NGS0 311 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 OR51Q1Q8NH59 317 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 HPSE2Q8WWQ2 592 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 RNF2Q99496 336 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 SLC2A9Q9NRM0 540 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 ZNF226Q9NYT6 803 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 DOK5Q9P104 306 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 EXOSC1Q9Y3B2 195 aaKnown RBP8.9□□□□□ -0.98
USP54-205ENST00000424265 FBXO7Q9Y3I1 522 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 ZFC3H1O60293 1989 aaKnown RBP8.9□□□□□ -0.98
USP54-205ENST00000424265 SNRPGP15A8MWD9 76 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms