RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 ADAMTS16Q8TE57 1224 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 LRR1Q96L50 414 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF385AQ96PM9 386 aaKnown RBP4.89□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF317Q96PQ6 595 aaPredicted RBP4.89□□□□□ -1.63
LINC00458-201ENST00000423442 DHRS9Q9BPW9 319 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 TMEM43Q9BTV4 400 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 FNDC11Q9BVV2 318 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 LINC00470Q9BZP3 86 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 SLC19A3Q9BZV2 496 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 POLR2J2Q9GZM3 115 aaKnown RBP4.89□□□□□ -1.63
LINC00458-201ENST00000423442 POLR2J3Q9H1A7 115 aaKnown RBP4.89□□□□□ -1.63
LINC00458-201ENST00000423442 KCNN2Q9H2S1 579 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 IKZF5Q9H5V7 419 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF385DQ9H6B1 395 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 SLC17A5Q9NRA2 495 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF446Q9NWS9 450 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 ARMCX1Q9P291 453 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 MALT1Q9UDY8 824 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 RIMS3Q9UJD0 308 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 RCE1Q9Y256 329 aa4.89□□□□□ -1.63
LINC00458-201ENST00000423442 FAM32AQ9Y421 112 aaKnown RBP4.89□□□□□ -1.63
LINC00458-201ENST00000423442 SONP18583 2426 aaKnown RBP4.88□□□□□ -1.63
LINC00458-201ENST00000423442 ALPK2Q86TB3 2170 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 A0A0B4J2E0 115 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 A0A1B0GX12 115 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 C11orf98E9PRG8 122 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 M0R3G1 203 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 AP4M1O00189 453 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 PLPP3O14495 311 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 PHF1O43189 567 aaPredicted RBP4.88□□□□□ -1.63
LINC00458-201ENST00000423442 TPST2O60704 377 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 NPIPB7O75200 414 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 SERPINI2O75830 405 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 FARS2O95363 451 aaKnown RBP4.88□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF682O95780 498 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 BCL10O95999 233 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 IFNA2P01563 188 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 THRBP10828 461 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 CD79AP11912 226 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 HTR2AP28223 471 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 ARR3P36575 388 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 RBM34P42696 430 aaKnown RBP4.88□□□□□ -1.63
LINC00458-201ENST00000423442 CDH11P55287 796 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 DSCR9P59020 149 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 ARF1P84077 181 aaKnown RBP4.88□□□□□ -1.63
LINC00458-201ENST00000423442 EGR4Q05215 589 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 LIPEQ05469 1076 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 ST3GAL3Q11203 375 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 SELPLGQ14242 412 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 NRF1Q16656 503 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 TIGD6Q17RP2 521 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 LRRC23Q53EV4 343 aaPredicted RBP4.88□□□□□ -1.63
LINC00458-201ENST00000423442 CYBRD1Q53TN4 286 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 REP15Q6BDI9 236 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 CFAP161Q6P656 301 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 DEF8Q6ZN54 512 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 C1orf122Q6ZSJ8 110 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 SLC35D2Q76EJ3 337 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 CARM1Q86X55 608 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 ADPRHL1Q8NDY3 354 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 BCL2L2Q92843 193 aaPredicted RBP4.88□□□□□ -1.63
LINC00458-201ENST00000423442 RCN3Q96D15 328 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 SLC41A3Q96GZ6 507 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF583Q96ND8 569 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 ARHGDIGQ99819 225 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 RHNO1Q9BSD3 238 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 TMEM204Q9BSN7 226 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 CENPOQ9BU64 300 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 NDEL1Q9GZM8 345 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 LRMDAQ9H2I8 198 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 CRLF2Q9HC73 371 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 MRPL39Q9NYK5 338 aaKnown RBP4.88□□□□□ -1.63
LINC00458-201ENST00000423442 ADA2Q9NZK5 511 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 STX18Q9P2W9 335 aaKnown RBP4.88□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF229Q9UJW7 825 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 RPS6KA6Q9UK32 745 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 MED31Q9Y3C7 131 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 SLC25A15Q9Y619 301 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 CADP27708 2225 aa4.88□□□□□ -1.63
LINC00458-201ENST00000423442 ZNF99A8MXY4 864 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-201ENST00000423442 FAM220BPB1ANY3 271 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 MCIDASD6RGH6 385 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 FTCDNL1E5RQL4 147 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 RPL36A-HNRNPH2H7BZ11 118 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 CXCR6O00574 342 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 KPNA4O00629 521 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-201ENST00000423442 SLC16A6O15403 523 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 MGRN1O60291 552 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 UPK3AO75631 287 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 DCTN3O75935 186 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 OR5F1O95221 314 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 PTHP01270 115 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 BGLAPP02818 100 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 MT-ND1P03886 318 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 IFNW1P05000 195 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 ITGA5P08648 1049 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 OR8G3PP0DMU2 310 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 NR2C1P13056 603 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 CBR1P16152 277 aa4.87□□□□□ -1.63
LINC00458-201ENST00000423442 FUT1P19526 365 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms