RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 DAZAP2Q15038 168 aaPredicted RBP14.78□□□□□ -0.04
COL7A1-202ENST00000422991 BEX5Q5H9J7 111 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 PABPC1L2AQ5JQF8 200 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 TEX30Q5JUR7 227 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 HIST2H3PS2Q5TEC6 136 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 MEDAGQ5VYS4 303 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 SLC18B1Q6NT16 456 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 HIST2H3AQ71DI3 136 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 ERI1Q8IV48 349 aaKnown RBP14.78□□□□□ -0.04
COL7A1-202ENST00000422991 LINC00346Q8IVM7 164 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 C8orf59Q8N0T1 100 aaPredicted RBP14.78□□□□□ -0.04
COL7A1-202ENST00000422991 APH1BQ8WW43 257 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 RFKQ969G6 155 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 WNT5BQ9H1J7 359 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 HAO2Q9NYQ3 351 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 WARS2Q9UGM6 360 aaKnown RBP14.78□□□□□ -0.04
COL7A1-202ENST00000422991 FBXL3Q9UKT7 428 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 TIMM10BQ9Y5J6 103 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 HSPE1-MOB4S4R3N1 261 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-202ENST00000422991 A6NNC1 897 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 ZNF593O00488 134 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-202ENST00000422991 WBP4O75554 376 aaKnown RBP14.77□□□□□ -0.05
COL7A1-202ENST00000422991 SPARCP09486 303 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 CECR9P0C854 216 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 LOXP28300 417 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-202ENST00000422991 NAA10P41227 235 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-202ENST00000422991 RPS27P42677 84 aaKnown RBP14.77□□□□□ -0.05
COL7A1-202ENST00000422991 ISL1P61371 349 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 TMED1Q13445 227 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 RAB39AQ14964 217 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 CORO6Q6QEF8 472 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 ZNF584Q8IVC4 421 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 OR6N2Q8NGY6 317 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 AKR7LQ8NHP1 331 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 MARVELD3Q96A59 401 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 MS4A3Q96HJ5 214 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 CNN2Q99439 309 aaKnown RBP14.77□□□□□ -0.05
COL7A1-202ENST00000422991 CLN6Q9NWW5 311 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 GDF2Q9UK05 429 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-202ENST00000422991 TACC2O95359 2948 aa14.77□□□□□ -0.05
COL7A1-202ENST00000422991 CACNA1DQ01668 2161 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 DPRXA6NFQ7 191 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 RER1O15258 196 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 SGCEO43556 437 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 GOSR1O95249 250 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 SERPINA5P05154 406 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 PTAFRP25105 342 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 CD40P25942 277 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 BSPH1Q075Z2 132 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 RAB35Q15286 201 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 NCMAPQ5T1S8 102 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 ZNF774Q6NX45 483 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 TMEM108Q6UXF1 575 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 CFAP77Q6ZQR2 320 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 VASH1Q7L8A9 365 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-202ENST00000422991 GJC3Q8NFK1 279 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 OR2AJ1Q8NGZ0 328 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 CNIH3Q8TBE1 160 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 PLPPR2Q96GM1 343 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 Q96MT0 163 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 ZNF184Q99676 751 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-202ENST00000422991 CDADC1Q9BWV3 514 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 ESRP2Q9H6T0 727 aaKnown RBP14.76□□□□□ -0.05
COL7A1-202ENST00000422991 ADGRL4Q9HBW9 690 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.76□□□□□ -0.05
COL7A1-202ENST00000422991 CADP27708 2225 aa14.76□□□□□ -0.05
COL7A1-202ENST00000422991 DOK2O60496 412 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 TMCC2O75069 709 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 MRPL3P09001 348 aaKnown RBP14.75□□□□□ -0.05
COL7A1-202ENST00000422991 MTNR1AP48039 350 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 NR1H2P55055 460 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 PLP2Q04941 152 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 ZNF91Q05481 1191 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 POU4F2Q12837 409 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 CCDC92Q53HC0 331 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-202ENST00000422991 SHFQ7M4L6 423 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 SLC16A9Q7RTY1 509 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 DPY19L4Q7Z388 723 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 THAP5Q7Z6K1 395 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 CPEB3Q8NE35 698 aaKnown RBP14.75□□□□□ -0.05
COL7A1-202ENST00000422991 FBLIM1Q8WUP2 373 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 PIK3IP1Q96FE7 263 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 MAP6Q96JE9 813 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 ANKRD60Q9BZ19 345 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 YIPF3Q9GZM5 350 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 C1orf198Q9H425 327 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 PLEK2Q9NYT0 353 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 ATPIF1Q9UII2 106 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 RAB26Q9ULW5 256 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 ABCA4P78363 2273 aa14.75□□□□□ -0.05
COL7A1-202ENST00000422991 LRBAP50851 2863 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 IQCMA0A1B0GVH7 501 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 OR6C6A6NF89 314 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 SNTNA6NMZ2 147 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 SYNGR3O43761 229 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 PTHP01270 115 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 COX5BP10606 129 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 MYF6P23409 242 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 APEX1P27695 318 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms