RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 NGFP01138 241 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 COX4I1P13073 169 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 EPHA1P21709 976 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 GATA3P23771 443 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 HTR5AP47898 357 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 GSK3BP49841 420 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 GUCY1A3Q02108 690 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 AQP6Q13520 282 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 ZBED5Q49AG3 693 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 MESTQ5EB52 335 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 TMEM255AQ5JRV8 349 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 HACD2Q6Y1H2 254 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 THSD4Q6ZMP0 1018 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 USP43Q70EL4 1123 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 RRM2BQ7LG56 351 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 C1QL2Q7Z5L3 287 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 PEG10Q86TG7 708 aaKnown RBP9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 FAM162AQ96A26 154 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 COG8Q96MW5 612 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 ZNF570Q96NI8 536 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 EMC7Q9NPA0 242 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 TBCCD1Q9NVR7 557 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 GMPR2Q9P2T1 348 aaKnown RBP9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 ADAM18Q9Y3Q7 739 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 ENPP4Q9Y6X5 453 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 LOC105371242A0A075B767 164 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 TEX13CA0A0J9YWL9 993 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 A0A1W2PRQ8 180 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 ISPDA4D126 451 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 J3QW42 95 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 SGCEO43556 437 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 NDUFB2O95178 105 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 CTLA4P16410 223 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 TNFSF4P23510 183 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 NUDT2P50583 147 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 HILS1P60008 231 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 TNFAIP6P98066 277 aaPredicted RBP9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 KRR1Q13601 381 aaKnown RBP9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 DGCR6Q14129 220 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 HSP90B2PQ58FF3 399 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 DCAF12L2Q5VW00 463 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 GPR139Q6DWJ6 353 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 C8orf82Q6P1X6 216 aaPredicted RBP9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 TBPL2Q6SJ96 375 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 C12orf54Q6X4T0 127 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 FAM122BQ7Z309 247 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 ADCK1Q86TW2 530 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 SLC7A13Q8TCU3 470 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 Q96M85 177 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 JMJD8Q96S16 334 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 GPX7Q96SL4 187 aaPredicted RBP9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 KCTD14Q9BQ13 255 aaPredicted RBP9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 TMPRSS13Q9BYE2 586 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 EFCAB1Q9HAE3 211 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 NMNAT1Q9HAN9 279 aaPredicted RBP9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 MSL2Q9HCI7 577 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 KRCC1Q9NPI7 259 aaPredicted RBP9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 ATPIF1Q9UII2 106 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 RPS6KA6Q9UK32 745 aa9.79□□□□□ -0.84
SQSTM1-203ENST00000422245 SCG5P05408 212 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 H1F0P07305 194 aaKnown RBP9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 ZNF26P17031 533 aaPredicted RBP9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 TNFRSF1AP19438 455 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 KITLGP21583 273 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 SDHAP31040 664 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 LIMS1P48059 325 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 ACTG1P63261 375 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 PSG7Q13046 419 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 CDK5R2Q13319 367 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 FGD3Q5JSP0 725 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 C1orf229Q6ZS94 237 aaPredicted RBP9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 VASH1Q7L8A9 365 aaPredicted RBP9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 SPICQ8N5J4 248 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 ST7LQ8TDW4 575 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 RASD2Q96D21 266 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 FAM46AQ96IP4 442 aaKnown RBP9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 RSRC1Q96IZ7 334 aaKnown RBP9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 RBM4Q9BWF3 364 aaKnown RBP9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 SUCNR1Q9BXA5 334 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 SYT4Q9H2B2 425 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 TMEM106BQ9NUM4 274 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 ZNF446Q9NWS9 450 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 PLEK2Q9NYT0 353 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 UBAP1Q9NZ09 502 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 ABCD2Q9UBJ2 740 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 KLHL21Q9UJP4 597 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 PURGQ9UJV8 347 aaKnown RBP9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 PCDHB10Q9UN67 800 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 SIGLEC7Q9Y286 467 aa9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 FAM32AQ9Y421 112 aaKnown RBP9.78□□□□□ -0.84
SQSTM1-203ENST00000422245 PPIAL4EA0A075B759 164 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 PPIAL4CA0A0B4J2A2 164 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 OR6C6A6NF89 314 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 PPIAL4DF5H284 164 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 TRIM77I1YAP6 450 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 SURF4O15260 269 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 SLC16A7O60669 478 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 KHDRBS3O75525 346 aaKnown RBP9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 FOXH1O75593 365 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 AVPP01185 164 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms