RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 NAAAQ02083 359 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 RUNX1T1Q06455 604 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 KRT72Q14CN4 511 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 TRAM2Q15035 370 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 SAMD4BQ5PRF9 694 aaKnown RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 GLYATQ6IB77 296 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 C11orf71Q6IPW1 123 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF544Q6NX49 715 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 C16orf89Q6UX73 402 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF813Q6ZN06 617 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 KCTD20Q7Z5Y7 419 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 TSEN54Q7Z6J9 526 aaKnown RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 MDP1Q86V88 176 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 CYP4Z1Q86W10 505 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 MEX3DQ86XN8 651 aaKnown RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 FBXL14Q8N1E6 418 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 MUC15Q8N387 334 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 NOXO1Q8NFA2 376 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 ASB10Q8WXI3 467 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 ACOT11Q8WXI4 607 aaPredicted RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 BPIFA2Q96DR5 249 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 SLC25A44Q96H78 314 aaPredicted RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 SEPHS2Q99611 448 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 KCNS3Q9BQ31 491 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 KATNB1Q9BVA0 655 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 NOX3Q9HBY0 568 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 INIPQ9NRY2 104 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 DCAF13Q9NV06 445 aaKnown RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 NDE1Q9NXR1 346 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 NDUFAF4Q9P032 175 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 POFUT2Q9Y2G5 429 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 ENPP4Q9Y6X5 453 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 ANK3Q12955 4377 aaKnown RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 TLN2Q9Y4G6 2542 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 HEATR1Q9H583 2144 aaKnown RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 NIPBLQ6KC79 2804 aaeCLIP5.98□□□□□ -1.45
HMGN1-205ENST00000419378 TRAV27A0A087WT01 109 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 A0A087WUU8 490 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 UNC119BA6NIH7 251 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 NPIPB13A6NJU9 1138 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 EFCAB9A8MZ26 197 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 CENPBD1B2RD01 187 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 NPIPB4C9JG80 1138 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 MCIDASD6RGH6 385 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 H7C1Q1 480 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 hCG_2039718K7EN88 272 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 ARPC2O15144 300 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 DHHO43323 396 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 NDUFS7O75251 213 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 GMNNO75496 209 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 DIRAS1O95057 198 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 FAM107AO95990 144 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 IGHV4-39P01824 125 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 SAGP10523 405 aaPredicted RBP5.98□□□□□ -1.45
HMGN1-205ENST00000419378 CBR1P16152 277 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 GATA3P23771 443 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 ARR3P36575 388 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 GPR4P46093 362 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 PTDSS1P48651 473 aaKnown RBP5.98□□□□□ -1.45
HMGN1-205ENST00000419378 VLDLRP98155 873 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 PRKCDQ05655 676 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 NPRL3Q12980 569 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 FHL1Q13642 323 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 HLXQ14774 488 aaPredicted RBP5.98□□□□□ -1.45
HMGN1-205ENST00000419378 ETFDHQ16134 617 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 HIST3H3Q16695 136 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 GSG1Q2KHT4 349 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 ALG10Q5BKT4 473 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 ARMC4Q5T2S8 1044 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 GKAP1Q5VSY0 366 aaPredicted RBP5.98□□□□□ -1.45
HMGN1-205ENST00000419378 TBPL2Q6SJ96 375 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF730Q6ZMV8 503 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 MBOAT2Q6ZWT7 520 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 HDDC2Q7Z4H3 204 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 IGFN1Q86VF2 1251 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 CCDC36Q8IYA8 594 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 DEFB107AQ8IZN7 70 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 RNF113BQ8IZP6 322 aaKnown RBP5.98□□□□□ -1.45
HMGN1-205ENST00000419378 CIARTQ8N365 385 aaPredicted RBP5.98□□□□□ -1.45
HMGN1-205ENST00000419378 CCDC197Q8NCU1 140 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 OR13C2Q8NGS9 318 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 TRMT61AQ96FX7 289 aaKnown RBP5.98□□□□□ -1.45
HMGN1-205ENST00000419378 C18orf12Q96KH6 178 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 C7orf34Q96L11 122 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 NSMCE2Q96MF7 247 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF347Q96SE7 839 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 CDRT15Q96T59 188 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 CACNG6Q9BXT2 260 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 MRPL13Q9BYD1 178 aaKnown RBP5.98□□□□□ -1.45
HMGN1-205ENST00000419378 ANKRD19PQ9H560 264 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 GORASP2Q9H8Y8 452 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 NMNAT1Q9HAN9 279 aaPredicted RBP5.98□□□□□ -1.45
HMGN1-205ENST00000419378 CA10Q9NS85 328 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 CBLN4Q9NTU7 201 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 TMEM38BQ9NVV0 291 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 B3GNT2Q9NY97 397 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF224Q9NZL3 707 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 CD300AQ9UGN4 299 aa5.98□□□□□ -1.45
HMGN1-205ENST00000419378 V9GYQ6 96 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms