RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 MGMTP16455 207 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 CD1CP29017 333 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 RABIFP47224 123 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 NR0B1P51843 470 aaKnown RBP13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 AKR1C2P52895 323 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 CAPZA1P52907 286 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 HSD17B7P56937 341 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 IGLV3-21P80748 117 aaPredicted RBP13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 AKR1C1Q04828 323 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 PMPCAQ10713 525 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 KCTD9Q7L273 389 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 MAMDC2Q7Z304 686 aaPredicted RBP13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 LINC00346Q8IVM7 164 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 ZSCAN1Q8NBB4 408 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 TMEM185AQ8NFB2 350 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 RNF128Q8TEB7 428 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 ZBTB8AQ96BR9 441 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 CMBLQ96DG6 245 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 SLC41A2Q96JW4 573 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 SLC6A7Q99884 636 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 MICU1Q9BPX6 476 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 SLC25A21Q9BQT8 299 aaPredicted RBP13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 TBL1XR1Q9BZK7 514 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 CENPMQ9NSP4 180 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 GPN3Q9UHW5 284 aaPredicted RBP13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 LRP12Q9Y561 859 aa13.65□□□□□ -0.23
SEMA3B-203ENST00000419007 LMX1BO60663 402 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 DCNP07585 359 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 AGTR1P30556 359 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 SLC37A1P57057 533 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 INSM1Q01101 510 aaPredicted RBP13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 MC2RQ01718 297 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 ZP2Q05996 745 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 CCINQ13939 588 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 TTLL10Q6ZVT0 673 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 PTPMT1Q8WUK0 201 aaPredicted RBP13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 IFT46Q9NQC8 304 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 SOX1O00570 391 aaPredicted RBP13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 TPPPO94811 219 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 CLPSP04118 112 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 UBBP0CG47 229 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 UBCP0CG48 685 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 DLSTP36957 453 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 RPL27P61353 136 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 RPS27AP62979 156 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 UBA52P62987 128 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 CLVS2Q5SYC1 327 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 HLA-DQA1Q5Y7H0 255 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 PPP1R1CQ8WVI7 109 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 CCNL2Q96S94 520 aaPredicted RBP13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 DZANK1Q9NVP4 752 aa13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 COA3Q9Y2R0 106 aaPredicted RBP13.64□□□□□ -0.23
SEMA3B-203ENST00000419007 IGFBP4P22692 258 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 RORAP35398 523 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 PPICP45877 212 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 EIF1AXP47813 144 aaKnown RBP13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 ATP1B3P54709 279 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 OR52W1Q6IF63 320 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 TMEM229BQ8NBD8 167 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 ASB17Q8WXJ9 295 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 SLC25A32Q9H2D1 315 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 SLCO1B1Q9Y6L6 691 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 TRAV36DV7A0A075B6V5 113 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 A0A0D9SG52 128 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 FAM74A7A6NL05 159 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 EEF1E1-BLOC1S5C9J1V9 151 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 F5H0A9 414 aaPredicted RBP13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 GP1BBP13224 206 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 GNALP38405 381 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 FAM74A3Q4VXF1 159 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 RNASE10Q5GAN6 216 aaKnown RBP13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 PAPD4Q6PIY7 484 aaKnown RBP13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 UNQ6126/PRO20091Q6UXV3 157 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 GVQW1Q8N7I0 195 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 THRSPQ92748 146 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 KLK13Q9UKR3 277 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 CYP8B1Q9UNU6 501 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 PIAS3Q9Y6X2 628 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 RTTNQ86VV8 2226 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 ASXL3Q9C0F0 2248 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 A0A1W2PPC1 479 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 TMEM150CB9EJG8 249 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 BGLAPP02818 100 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 AVPR2P30518 371 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 GFERP55789 205 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 SERTAD2Q14140 314 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 SLC22A6Q4U2R8 563 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 ADGRE4PQ86SQ3 457 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 TDHQ8IZJ6 230 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 BPIFCQ8NFQ6 507 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 OR5M8Q8NGP6 311 aa13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 ZNF587Q96SQ5 575 aaPredicted RBP13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 ALX4Q9H161 411 aaPredicted RBP13.63□□□□□ -0.23
SEMA3B-203ENST00000419007 LOC107986453A0A1B0GWG9 222 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 AKR1C4P17516 323 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 IL32P24001 234 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 FGL1Q08830 312 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 FZD2Q14332 565 aa13.62□□□□□ -0.23
SEMA3B-203ENST00000419007 CORO6Q6QEF8 472 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms