RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 EFNB3Q15768 340 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 PCK2Q16822 640 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 ZNF774Q6NX45 483 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 VASH1Q7L8A9 365 aaPredicted RBP16.09■□□□□ 0.17
PTCD3-204ENST00000418628 OR9Q1Q8NGQ5 310 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 AKR7LQ8NHP1 331 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 CIB1Q99828 191 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 USE1Q9NZ43 259 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 ASH2LQ9UBL3 628 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 OR6C6A6NF89 314 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 SAC3D1A6NKF1 404 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 ZAR1LA6NP61 321 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 E9PQ18 207 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 GPRIN2O60269 458 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 HMGN1P05114 100 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 ALPLP05186 524 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 CLUP10909 449 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 PSKH1P11801 424 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 IGFBP5P24593 272 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 STOMP27105 288 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 POU1F1P28069 291 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 PYCR1P32322 319 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 THBS4P35443 961 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 GLRXP35754 106 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 ART1P52961 327 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 TEKQ02763 1124 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 PTGES3Q15185 160 aaKnown RBP16.08■□□□□ 0.16
PTCD3-204ENST00000418628 TBC1D28Q2M2D7 210 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 CCDC92Q53HC0 331 aaPredicted RBP16.08■□□□□ 0.16
PTCD3-204ENST00000418628 AGAP6Q5VW22 663 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 TMEM236Q5W0B7 351 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 KRT80Q6KB66 452 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 SLC18B1Q6NT16 456 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 LYPD4Q6UWN0 246 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 SPNS3Q6ZMD2 512 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 FBXL14Q8N1E6 418 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 PQLC1Q8N2U9 271 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 ICA1LQ8NDH6 482 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 OR1J2Q8NGS2 313 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 PTP4A1Q93096 173 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 CXorf56Q9H5V9 222 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 MARCH7Q9H992 704 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 HINT3Q9NQE9 182 aaKnown RBP16.08■□□□□ 0.16
PTCD3-204ENST00000418628 CYB5R1Q9UHQ9 305 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 KCNG2Q9UJ96 466 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 COMMD3-BMI1R4GMX3 469 aa16.08■□□□□ 0.16
PTCD3-204ENST00000418628 FAM171A2A8MVW0 826 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 SGCEO43556 437 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 DOK2O60496 412 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 GYPBP06028 91 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 CCL2P13500 99 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 SLC2A5P22732 501 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 APLNRP35414 380 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 WNT5AP41221 380 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 PTH2RP49190 550 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 FABP6P51161 128 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 EFNB1P98172 346 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 RAB35Q15286 201 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 KRTAP27-1Q3LI81 207 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 SLX4IPQ5VYV7 408 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 C12orf73Q69YU5 71 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 PROKR2Q8NFJ6 384 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 RBM4BQ9BQ04 359 aaKnown RBP16.07■□□□□ 0.16
PTCD3-204ENST00000418628 PNRC2Q9NPJ4 139 aaKnown RBP16.07■□□□□ 0.16
PTCD3-204ENST00000418628 ENOPH1Q9UHY7 261 aa16.07■□□□□ 0.16
PTCD3-204ENST00000418628 NDRG4Q9ULP0 352 aaKnown RBP16.07■□□□□ 0.16
PTCD3-204ENST00000418628 TMEM129A0AVI4 362 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 FAM183AA6NL82 134 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 H7C417 338 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 RER1O15258 196 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 SMPD2O60906 423 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 CENPAP49450 140 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 TEX30Q5JUR7 227 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 ALDH16A1Q8IZ83 802 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 ZNF101Q8IZC7 436 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 OR51L1Q8NGJ5 315 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 MRPL24Q96A35 216 aaKnown RBP16.06■□□□□ 0.16
PTCD3-204ENST00000418628 PLK3Q9H4B4 646 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 MED20Q9H944 212 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 CDH20Q9HBT6 801 aa16.06■□□□□ 0.16
PTCD3-204ENST00000418628 B9A039 149 aa16.05■□□□□ 0.16
PTCD3-204ENST00000418628 EI24O14681 340 aa16.05■□□□□ 0.16
PTCD3-204ENST00000418628 PRODHO43272 600 aa16.05■□□□□ 0.16
PTCD3-204ENST00000418628 OR4A8P0C604 315 aa16.05■□□□□ 0.16
PTCD3-204ENST00000418628 SERPINF1P36955 418 aa16.05■□□□□ 0.16
PTCD3-204ENST00000418628 RPS23P62266 143 aaKnown RBP16.05■□□□□ 0.16
PTCD3-204ENST00000418628 GALK2Q01415 458 aa16.05■□□□□ 0.16
PTCD3-204ENST00000418628 CFAP77Q6ZQR2 320 aa16.05■□□□□ 0.16
PTCD3-204ENST00000418628 GJC3Q8NFK1 279 aa16.05■□□□□ 0.16
PTCD3-204ENST00000418628 OR10S1Q8NGN2 331 aa16.05■□□□□ 0.16
PTCD3-204ENST00000418628 COQ7Q99807 217 aa16.05■□□□□ 0.16
PTCD3-204ENST00000418628 HDHD2Q9H0R4 259 aa16.05■□□□□ 0.16
PTCD3-204ENST00000418628 GDF2Q9UK05 429 aaPredicted RBP16.05■□□□□ 0.16
PTCD3-204ENST00000418628 IGLV3-9A0A075B6K5 115 aa16.04■□□□□ 0.16
PTCD3-204ENST00000418628 GLCEO94923 617 aa16.04■□□□□ 0.16
PTCD3-204ENST00000418628 CDKN1AP38936 164 aa16.04■□□□□ 0.16
PTCD3-204ENST00000418628 HTR5AP47898 357 aa16.04■□□□□ 0.16
PTCD3-204ENST00000418628 EVX1P49640 407 aa16.04■□□□□ 0.16
PTCD3-204ENST00000418628 GDI2P50395 445 aaKnown RBP16.04■□□□□ 0.16
PTCD3-204ENST00000418628 ALDH3A2P51648 485 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms