RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 NMNAT3Q96T66 252 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 ZNF696Q9H7X3 374 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 SMURF2Q9HAU4 748 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 SRA1Q9HD15 236 aaKnown RBP15.43■□□□□ 0.06
VCP-202ENST00000417448 B3GNT2Q9NY97 397 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 H3BNX3 289 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 DCTN6O00399 190 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 SLC16A7O60669 478 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 ENTPD5O75356 428 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 MPZL1O95297 269 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 FASP25445 335 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 GIPRP48546 466 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 PTDSS1P48651 473 aaKnown RBP15.42■□□□□ 0.06
VCP-202ENST00000417448 CENPAP49450 140 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 ZNF133P52736 654 aaPredicted RBP15.42■□□□□ 0.06
VCP-202ENST00000417448 HILS1P60008 231 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 SLC36A3Q495N2 470 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 THEM4Q5T1C6 240 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 FAM205BPQ63HN1 556 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 UGT2A3Q6UWM9 527 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.42■□□□□ 0.06
VCP-202ENST00000417448 CYB561A3Q8NBI2 242 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 SDR9C7Q8NEX9 313 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 OR52E2Q8NGJ4 325 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 NABP1Q96AH0 204 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 BOD1Q96IK1 185 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 PKP2Q99959 881 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 NUAK2Q9H093 628 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 EMC7Q9NPA0 242 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 IL20Q9NYY1 176 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 STX18Q9P2W9 335 aaKnown RBP15.42■□□□□ 0.06
VCP-202ENST00000417448 NOTCH1P46531 2555 aa15.42■□□□□ 0.06
VCP-202ENST00000417448 SAC3D1A6NKF1 404 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 CENPBD1B2RD01 187 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 BHLHE40O14503 412 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 MITFO75030 526 aaPredicted RBP15.41■□□□□ 0.06
VCP-202ENST00000417448 TXNDC12O95881 172 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 CECR9P0C854 216 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 OR8G3PP0DMU2 310 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 CBR1P16152 277 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 NOS3P29474 1203 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 CALCRP30988 508 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 DAPP51397 102 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 RAB1AP62820 205 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.41■□□□□ 0.06
VCP-202ENST00000417448 RAB39AQ14964 217 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 SHQ1Q6PI26 577 aaKnown RBP15.41■□□□□ 0.06
VCP-202ENST00000417448 ZNF627Q7L945 461 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 ATG16L2Q8NAA4 619 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 OR52L1Q8NGH7 329 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 OR5K1Q8NHB7 308 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 SLC38A2Q96QD8 506 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 RAB3IPQ96QF0 476 aaPredicted RBP15.41■□□□□ 0.06
VCP-202ENST00000417448 RNF121Q9H920 327 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 COA3Q9Y2R0 106 aaPredicted RBP15.41■□□□□ 0.06
VCP-202ENST00000417448 PCDHGB1Q9Y5G3 927 aa15.41■□□□□ 0.06
VCP-202ENST00000417448 OR6C68A6NDL8 312 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 H3BN98 237 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 DAOP14920 347 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 HOXB6P17509 224 aaKnown RBP15.4■□□□□ 0.06
VCP-202ENST00000417448 GSTM3P21266 225 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 LAP3P28838 519 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 SERPINF1P36955 418 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 GABPB1Q06547 395 aaPredicted RBP15.4■□□□□ 0.06
VCP-202ENST00000417448 ZSCAN26Q16670 478 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 GSG1Q2KHT4 349 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 ZNF362Q5T0B9 420 aaPredicted RBP15.4■□□□□ 0.06
VCP-202ENST00000417448 TMEM236Q5W0B7 351 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 SLC16A14Q7RTX9 510 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 JAZF1Q86VZ6 243 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 ICA1LQ8NDH6 482 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 ZNF418Q8TF45 676 aaPredicted RBP15.4■□□□□ 0.06
VCP-202ENST00000417448 ZNRF4Q8WWF5 429 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 ZNF75AQ96N20 296 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 OBP2BQ9NPH6 170 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 RPRD1BQ9NQG5 326 aaKnown RBP15.4■□□□□ 0.06
VCP-202ENST00000417448 VSX1Q9NZR4 365 aaPredicted RBP15.4■□□□□ 0.06
VCP-202ENST00000417448 PCDHB10Q9UN67 800 aa15.4■□□□□ 0.06
VCP-202ENST00000417448 ERICH4A6NGS2 130 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 TRIM77I1YAP6 450 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 ARPC3O15145 178 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 CCL2P13500 99 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 HOXB1P14653 301 aaPredicted RBP15.39■□□□□ 0.05
VCP-202ENST00000417448 PPOXP50336 477 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 MRPS34P82930 218 aaKnown RBP15.39■□□□□ 0.05
VCP-202ENST00000417448 ADIPOQQ15848 244 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 MEP1BQ16820 701 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 ACSM5Q6NUN0 579 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 CD300LDQ6UXZ3 194 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 OR6V1Q8N148 313 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 ZCCHC24Q8N2G6 241 aaKnown RBP15.39■□□□□ 0.05
VCP-202ENST00000417448 SVOPLQ8N434 492 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 NPEPL1Q8NDH3 523 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 RBM4Q9BWF3 364 aaKnown RBP15.39■□□□□ 0.05
VCP-202ENST00000417448 PLK3Q9H4B4 646 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 MED20Q9H944 212 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 CA10Q9NS85 328 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 KIF17Q9P2E2 1029 aa15.39■□□□□ 0.05
VCP-202ENST00000417448 CRNNQ9UBG3 495 aaPredicted RBP15.39■□□□□ 0.05
VCP-202ENST00000417448 ARRDC5A6NEK1 342 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms