RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SPG11Q96JI7 2443 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 OTOGQ6ZRI0 2925 aa19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 CCNOP22674 350 aa19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 PCSK6P29122 969 aa19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 SERPINF1P36955 418 aa19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 RAD52P43351 418 aa19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 NKX6-1P78426 367 aaPredicted RBP19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 MEP1BQ16820 701 aa19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 ARL9Q6T311 187 aa19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 OR51L1Q8NGJ5 315 aa19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 PTP4A1Q93096 173 aa19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 POM121L2Q96KW2 1035 aa19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 TRAF4Q9BUZ4 470 aaPredicted RBP19.96■□□□□ 0.79
SMARCB1-205ENST00000417137 C5orf49A4QMS7 147 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 FAM183AA6NL82 134 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 ANKRD65E5RJM6 399 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 DOK2O60496 412 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 GYPBP06028 91 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 OR4A8P0C604 315 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 CCL2P13500 99 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 THBS4P35443 961 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 GLRXP35754 106 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 ART1P52961 327 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 OR6K6Q8NGW6 343 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 IGFBPL1Q8WX77 278 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 TRMT61AQ96FX7 289 aaKnown RBP19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 BCL2L14Q9BZR8 327 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 USE1Q9NZ43 259 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 CMAHPQ9Y471 501 aa19.95■□□□□ 0.78
SMARCB1-205ENST00000417137 ROS1P08922 2347 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 HEATR1Q9H583 2144 aaKnown RBP19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 ERICH4A6NGS2 130 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 ZAR1LA6NP61 321 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 CD8AP01732 235 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 HTR5AP47898 357 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 ALDH3A2P51648 485 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 RAD23AP54725 363 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 UCP2P55851 309 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 ADAM8P78325 824 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 DBPQ10586 325 aaPredicted RBP19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 ADIPOQQ15848 244 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 SLX4IPQ5VYV7 408 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 OTPQ5XKR4 325 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 PLBD1Q6P4A8 553 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 VASH1Q7L8A9 365 aaPredicted RBP19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 CPOQ8IVL8 374 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 C1orf174Q8IYL3 243 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 LRRC75A-AS1Q8N1F1 130 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 OR51V1Q9H2C8 321 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 MED20Q9H944 212 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 MRPL22Q9NWU5 206 aaKnown RBP19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 CYB5R1Q9UHQ9 305 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 ATPIF1Q9UII2 106 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 FBXO9Q9UK97 447 aaPredicted RBP19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 LHFPL6Q9Y693 200 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 PMF1-BGLAPU3KQ54 211 aa19.94■□□□□ 0.78
SMARCB1-205ENST00000417137 LOC100509620A0A075B734 347 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 TVP23AA6NH52 213 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 B9A039 149 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 OVOL3O00110 214 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 EI24O14681 340 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 RER1O15258 196 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 GLCEO94923 617 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 ALPLP05186 524 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 CLUP10909 449 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 GGT2P36268 569 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 HIST1H3AP68431 136 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 RAB35Q15286 201 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 HIST2H3PS2Q5TEC6 136 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 ZBTB49Q6ZSB9 765 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 HIST2H3AQ71DI3 136 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 PAQR4Q8N4S7 273 aaPredicted RBP19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 CBR4Q8N4T8 237 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 OR1F12Q8NHA8 337 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 ZNRF4Q8WWF5 429 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 EME1Q96AY2 570 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 GABARAPL3Q9BY60 117 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 HDHD2Q9H0R4 259 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 RIBC2Q9H4K1 309 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 ELOVL3Q9HB03 270 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 AKAP6Q13023 2319 aa19.93■□□□□ 0.78
SMARCB1-205ENST00000417137 HRNRQ86YZ3 2850 aaPredicted RBP19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 PRODHO43272 600 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 PAX1P15863 534 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 GSTT1P30711 240 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 ENTPD1P49961 510 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 EFNB3Q15768 340 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 CCDC92Q53HC0 331 aaPredicted RBP19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 SLC35D3Q5M8T2 416 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 ELFN2Q5R3F8 820 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 SLC18B1Q6NT16 456 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 CORO6Q6QEF8 472 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 CXXC5Q7LFL8 322 aaKnown RBP19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 ZNF511Q8NB15 262 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 IPCEF1Q8WWN9 437 aaPredicted RBP19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 HCAR1Q9BXC0 346 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 GSX2Q9BZM3 304 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 HINT3Q9NQE9 182 aaKnown RBP19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 ZNF701Q9NV72 531 aaPredicted RBP19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 GDF2Q9UK05 429 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms