RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 SH3GL3Q99963 347 aa12.48□□□□□ -0.41
SF3B1-204ENST00000414963 ALG8Q9BVK2 526 aa12.48□□□□□ -0.41
SF3B1-204ENST00000414963 MND1Q9BWT6 205 aa12.48□□□□□ -0.41
SF3B1-204ENST00000414963 KCNN2Q9H2S1 579 aa12.48□□□□□ -0.41
SF3B1-204ENST00000414963 C1orf198Q9H425 327 aa12.48□□□□□ -0.41
SF3B1-204ENST00000414963 ZNF224Q9NZL3 707 aa12.48□□□□□ -0.41
SF3B1-204ENST00000414963 ASH2LQ9UBL3 628 aa12.48□□□□□ -0.41
SF3B1-204ENST00000414963 SCOCQ9UIL1 159 aa12.48□□□□□ -0.41
SF3B1-204ENST00000414963 ERRFI1Q9UJM3 462 aaPredicted RBP12.48□□□□□ -0.41
SF3B1-204ENST00000414963 GDF2Q9UK05 429 aaPredicted RBP12.48□□□□□ -0.41
SF3B1-204ENST00000414963 LSM2Q9Y333 95 aaKnown RBP12.48□□□□□ -0.41
SF3B1-204ENST00000414963 TIMM10BQ9Y5J6 103 aa12.48□□□□□ -0.41
SF3B1-204ENST00000414963 ARPC4-TTLL3A0A0A6YYG9 625 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 PRR32B1ATL7 298 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 ZNF254O75437 659 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 SEC14L2O76054 403 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 CLPTM1O96005 669 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 PTHP01270 115 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 RPS27P42677 84 aaKnown RBP12.47□□□□□ -0.41
SF3B1-204ENST00000414963 MAP2K4P45985 399 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 EIF2B1Q14232 305 aaKnown RBP12.47□□□□□ -0.41
SF3B1-204ENST00000414963 TBRG1Q3YBR2 411 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 FBXL19-AS1Q494R0 122 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 SLC36A2Q495M3 483 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 UBE2UQ5VVX9 321 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 KCTD18Q6PI47 426 aaPredicted RBP12.47□□□□□ -0.41
SF3B1-204ENST00000414963 CORO6Q6QEF8 472 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 STAC2Q6ZMT1 411 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 PLEKHG7Q6ZR37 379 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 KCTD8Q6ZWB6 473 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 SLC16A14Q7RTX9 510 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 FJX1Q86VR8 437 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 CXorf67Q86X51 503 aaPredicted RBP12.47□□□□□ -0.41
SF3B1-204ENST00000414963 LINC00346Q8IVM7 164 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 OR52N5Q8NH56 324 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 LILRB4Q8NHJ6 448 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 PRR7Q8TB68 274 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 CCDC120Q96HB5 630 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 OR8B4Q96RC9 309 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 AMELYQ99218 206 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 USB1Q9BQ65 265 aaKnown RBP12.47□□□□□ -0.41
SF3B1-204ENST00000414963 PNRC2Q9NPJ4 139 aaKnown RBP12.47□□□□□ -0.41
SF3B1-204ENST00000414963 B3GNT2Q9NY97 397 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 COQ3Q9NZJ6 369 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 POLR1DQ9Y2S0 133 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 CHD6Q8TD26 2715 aa12.47□□□□□ -0.41
SF3B1-204ENST00000414963 INTS1Q8N201 2190 aaKnown RBP12.47□□□□□ -0.41
SF3B1-204ENST00000414963 A0A096LPE4 126 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 A0A1W2PPZ6 126 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 CIB4A0PJX0 185 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 METTL15A6NJ78 407 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 MYL12BO14950 172 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 RER1O15258 196 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 LYZL6O75951 148 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 MT-ND5P03915 603 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 TFAP2AP05549 437 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 TACSTD2P09758 323 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 ATP6V1B1P15313 513 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 DCTDP32321 178 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 ARR3P36575 388 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 OPRL1P41146 370 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 UQCRFS1P47985 274 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 WNT4P56705 351 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 ACSM1Q08AH1 577 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 SCRN3Q0VDG4 424 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 SPHARQ15513 63 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 CCDC92Q53HC0 331 aaPredicted RBP12.46□□□□□ -0.41
SF3B1-204ENST00000414963 CFAP77Q6ZQR2 320 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 BHLHA15Q7RTS1 189 aaPredicted RBP12.46□□□□□ -0.41
SF3B1-204ENST00000414963 LUZP2Q86TE4 346 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 P2RY8Q86VZ1 359 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 ZNF679Q8IYX0 411 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 OR10S1Q8NGN2 331 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 FGFBP3Q8TAT2 258 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 HAVCR2Q8TDQ0 301 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 SNX33Q8WV41 574 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 SLAMF6Q96DU3 332 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 OR10A4Q9H209 315 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 VCX3AQ9NNX9 186 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 ISYNA1Q9NPH2 558 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 OBP2BQ9NPH6 170 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 SLC17A5Q9NRA2 495 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 DDX28Q9NUL7 540 aaKnown RBP12.46□□□□□ -0.41
SF3B1-204ENST00000414963 BABAM2Q9NXR7 383 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 GALNT8Q9NY28 637 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 SLCO1C1Q9NYB5 712 aa12.46□□□□□ -0.41
SF3B1-204ENST00000414963 MRM2Q9UI43 246 aaKnown RBP12.46□□□□□ -0.41
SF3B1-204ENST00000414963 EIF4E1BA6NMX2 242 aaKnown RBP12.45□□□□□ -0.42
SF3B1-204ENST00000414963 EEF1E1-BLOC1S5C9J1V9 151 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 EEF1E1O43324 174 aaKnown RBP12.45□□□□□ -0.42
SF3B1-204ENST00000414963 UBL3O95164 117 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 ABHD16AO95870 558 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 KRT8P05787 483 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 ZNF32P17041 273 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 AGAP20933 346 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 PAX7P23759 505 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 CD79BP40259 229 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 NR1H2P55055 460 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 OR12D2P58182 307 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 PSG4Q00888 419 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms