RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 HCCSP53701 268 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 OR10A3P58181 314 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 SRYQ05066 204 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 CDK5R1Q15078 307 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 PON3Q15166 354 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 ZNF239Q16600 458 aaKnown RBP8.84□□□□□ -0.99
DDB1-202ENST00000414411 ACSM3Q53FZ2 586 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 SLC35D3Q5M8T2 416 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 ATAD3CQ5T2N8 411 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 ADGRE4PQ86SQ3 457 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 OR10D3Q8NH80 312 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 OR2V1Q8NHB1 315 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 CPT1CQ8TCG5 803 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 ZPLD1Q8TCW7 415 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 RASD2Q96D21 266 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 SMIM19Q96E16 107 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 DNAJA3Q96EY1 480 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 KCNJ15Q99712 375 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 RNF121Q9H920 327 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 FKRPQ9H9S5 495 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 MOV10Q9HCE1 1003 aaKnown RBP8.84□□□□□ -0.99
DDB1-202ENST00000414411 NANSQ9NR45 359 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 CYSLTR2Q9NS75 346 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 RBFOX1Q9NWB1 397 aaKnown RBP8.84□□□□□ -0.99
DDB1-202ENST00000414411 EXTL2Q9UBQ6 330 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 HIF3AQ9Y2N7 669 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 ZNF835Q9Y2P0 537 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 RELNP78509 3460 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 MED12LQ86YW9 2145 aa8.84□□□□□ -0.99
DDB1-202ENST00000414411 A0A0B4J293 547 aa8.84□□□□□ -1
DDB1-202ENST00000414411 A0A1W2PRG6 482 aa8.84□□□□□ -1
DDB1-202ENST00000414411 OR6C68A6NDL8 312 aa8.84□□□□□ -1
DDB1-202ENST00000414411 PTGS2P35354 604 aa8.84□□□□□ -1
DDB1-202ENST00000414411 DDOSTP39656 456 aa8.84□□□□□ -1
DDB1-202ENST00000414411 NR4A2P43354 598 aa8.84□□□□□ -1
DDB1-202ENST00000414411 GDI2P50395 445 aaKnown RBP8.84□□□□□ -1
DDB1-202ENST00000414411 P2RY4P51582 365 aa8.84□□□□□ -1
DDB1-202ENST00000414411 GBX2P52951 348 aaPredicted RBP8.84□□□□□ -1
DDB1-202ENST00000414411 ERVK-25P63136 954 aa8.84□□□□□ -1
DDB1-202ENST00000414411 SLC35A1P78382 337 aa8.84□□□□□ -1
DDB1-202ENST00000414411 MFSD13AQ14CX5 517 aa8.84□□□□□ -1
DDB1-202ENST00000414411 OR7A5Q15622 319 aa8.84□□□□□ -1
DDB1-202ENST00000414411 C3AR1Q16581 482 aa8.84□□□□□ -1
DDB1-202ENST00000414411 UBE2J2Q8N2K1 259 aa8.84□□□□□ -1
DDB1-202ENST00000414411 MEIOBQ8N635 442 aa8.84□□□□□ -1
DDB1-202ENST00000414411 OR13C5Q8NGS8 318 aa8.84□□□□□ -1
DDB1-202ENST00000414411 MOSPD2Q8NHP6 518 aa8.84□□□□□ -1
DDB1-202ENST00000414411 ZNRF4Q8WWF5 429 aa8.84□□□□□ -1
DDB1-202ENST00000414411 SLC25A36Q96CQ1 311 aa8.84□□□□□ -1
DDB1-202ENST00000414411 ST6GAL2Q96JF0 529 aa8.84□□□□□ -1
DDB1-202ENST00000414411 DMRTB1Q96MA1 342 aa8.84□□□□□ -1
DDB1-202ENST00000414411 SRXN1Q9BYN0 137 aa8.84□□□□□ -1
DDB1-202ENST00000414411 NEK6Q9HC98 313 aa8.84□□□□□ -1
DDB1-202ENST00000414411 RASD1Q9Y272 281 aa8.84□□□□□ -1
DDB1-202ENST00000414411 ZNF462Q96JM2 2506 aa8.83□□□□□ -1
DDB1-202ENST00000414411 PCNX1Q96RV3 2341 aa8.83□□□□□ -1
DDB1-202ENST00000414411 TRAV1-2A0A0B4J238 106 aa8.83□□□□□ -1
DDB1-202ENST00000414411 A0A0G2JMP0 313 aa8.83□□□□□ -1
DDB1-202ENST00000414411 TEX13CA0A0J9YWL9 993 aa8.83□□□□□ -1
DDB1-202ENST00000414411 A0A0X1KG70 313 aa8.83□□□□□ -1
DDB1-202ENST00000414411 HMX3A6NHT5 357 aa8.83□□□□□ -1
DDB1-202ENST00000414411 AHRRA9YTQ3 701 aa8.83□□□□□ -1
DDB1-202ENST00000414411 ZNF814B7Z6K7 855 aa8.83□□□□□ -1
DDB1-202ENST00000414411 IMPA2O14732 288 aa8.83□□□□□ -1
DDB1-202ENST00000414411 MAGEB4O15481 346 aaPredicted RBP8.83□□□□□ -1
DDB1-202ENST00000414411 LYRM1O43325 122 aa8.83□□□□□ -1
DDB1-202ENST00000414411 CXCL13O43927 109 aa8.83□□□□□ -1
DDB1-202ENST00000414411 SELENOFO60613 162 aa8.83□□□□□ -1
DDB1-202ENST00000414411 SERPINA3P01011 423 aa8.83□□□□□ -1
DDB1-202ENST00000414411 CD1AP06126 327 aa8.83□□□□□ -1
DDB1-202ENST00000414411 EIF4EP06730 217 aaKnown RBP8.83□□□□□ -1
DDB1-202ENST00000414411 FAM157BP0CG42 384 aa8.83□□□□□ -1
DDB1-202ENST00000414411 APEHP13798 732 aaKnown RBP8.83□□□□□ -1
DDB1-202ENST00000414411 GRPRP30550 384 aa8.83□□□□□ -1
DDB1-202ENST00000414411 TALDO1P37837 337 aa8.83□□□□□ -1
DDB1-202ENST00000414411 RAD52P43351 418 aa8.83□□□□□ -1
DDB1-202ENST00000414411 EIF1AXP47813 144 aaKnown RBP8.83□□□□□ -1
DDB1-202ENST00000414411 CSNK2A1P68400 391 aaPredicted RBP8.83□□□□□ -1
DDB1-202ENST00000414411 SIRPAP78324 504 aa8.83□□□□□ -1
DDB1-202ENST00000414411 PDSS1Q5T2R2 415 aa8.83□□□□□ -1
DDB1-202ENST00000414411 PLET1Q6UQ28 207 aa8.83□□□□□ -1
DDB1-202ENST00000414411 PAMR1Q6UXH9 720 aa8.83□□□□□ -1
DDB1-202ENST00000414411 MAMDC2Q7Z304 686 aaPredicted RBP8.83□□□□□ -1
DDB1-202ENST00000414411 FAM122BQ7Z309 247 aa8.83□□□□□ -1
DDB1-202ENST00000414411 PM20D2Q8IYS1 436 aa8.83□□□□□ -1
DDB1-202ENST00000414411 SAMD12Q8N8I0 201 aa8.83□□□□□ -1
DDB1-202ENST00000414411 SCAIQ8N9R8 606 aa8.83□□□□□ -1
DDB1-202ENST00000414411 OR4M2Q8NGB6 313 aa8.83□□□□□ -1
DDB1-202ENST00000414411 OR4M1Q8NGD0 313 aa8.83□□□□□ -1
DDB1-202ENST00000414411 OR6K6Q8NGW6 343 aa8.83□□□□□ -1
DDB1-202ENST00000414411 FAM57AQ8TBR7 257 aa8.83□□□□□ -1
DDB1-202ENST00000414411 SNX33Q8WV41 574 aa8.83□□□□□ -1
DDB1-202ENST00000414411 ZNF845Q96IR2 970 aaPredicted RBP8.83□□□□□ -1
DDB1-202ENST00000414411 FANCFQ9NPI8 374 aa8.83□□□□□ -1
DDB1-202ENST00000414411 ACOXLQ9NUZ1 547 aa8.83□□□□□ -1
DDB1-202ENST00000414411 PAQR5Q9NXK6 330 aaPredicted RBP8.83□□□□□ -1
DDB1-202ENST00000414411 ALKBH4Q9NXW9 302 aa8.83□□□□□ -1
DDB1-202ENST00000414411 MRPL39Q9NYK5 338 aaKnown RBP8.83□□□□□ -1
DDB1-202ENST00000414411 COPS3Q9UNS2 423 aa8.83□□□□□ -1
DDB1-202ENST00000414411 CAMK2AQ9UQM7 478 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms