RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 KCNG2Q9UJ96 466 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 OR6C68A6NDL8 312 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 G3V2T6 193 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 M0R233 179 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 SYNGR3O43761 229 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 F12P00748 615 aaPredicted RBP12.68□□□□□ -0.38
CHD1-202ENST00000414220 GRK5P34947 590 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 HTR5AP47898 357 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 KLF3P57682 345 aaPredicted RBP12.68□□□□□ -0.38
CHD1-202ENST00000414220 TEKQ02763 1124 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 ATP6AP1Q15904 470 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 MST1LQ2TV78 715 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 ZNF718Q3SXZ3 478 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 ZNF774Q6NX45 483 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.68□□□□□ -0.38
CHD1-202ENST00000414220 ZDHHC13Q8IUH4 622 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 NPEPL1Q8NDH3 523 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 OR1J1Q8NGS3 322 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 NEU4Q8WWR8 484 aaPredicted RBP12.68□□□□□ -0.38
CHD1-202ENST00000414220 SLCO4A1Q96BD0 722 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 DUS3LQ96G46 650 aaKnown RBP12.68□□□□□ -0.38
CHD1-202ENST00000414220 PLEKHA8Q96JA3 519 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 POM121L2Q96KW2 1035 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 TSSK2Q96PF2 358 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 RAB3IPQ96QF0 476 aaPredicted RBP12.68□□□□□ -0.38
CHD1-202ENST00000414220 DCLRE1CQ96SD1 692 aaKnown RBP12.68□□□□□ -0.38
CHD1-202ENST00000414220 DOK1Q99704 481 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 PLA2G12AQ9BZM1 189 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 WNT5BQ9H1J7 359 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 ASH2LQ9UBL3 628 aa12.68□□□□□ -0.38
CHD1-202ENST00000414220 GDF2Q9UK05 429 aaPredicted RBP12.68□□□□□ -0.38
CHD1-202ENST00000414220 IGLV1-36A0A0B4J1U3 117 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 GPRIN2O60269 458 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 MPZL1O95297 269 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 FMO3P31513 532 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 NKPD1Q17RQ9 610 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 KRTAP1-3Q8IUG1 177 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 SLC37A3Q8NCC5 494 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 OR8D4Q8NGM9 314 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 ABHD4Q8TB40 342 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 UTP4Q969X6 686 aaKnown RBP12.67□□□□□ -0.38
CHD1-202ENST00000414220 C4orf45Q96LM5 186 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 PRRG3Q9BZD7 231 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 OR51B6Q9H340 312 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 PAPOLBQ9NRJ5 636 aaKnown RBP12.67□□□□□ -0.38
CHD1-202ENST00000414220 CMC2Q9NRP2 79 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 REV1Q9UBZ9 1251 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 ATPIF1Q9UII2 106 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 OTOGQ6ZRI0 2925 aa12.67□□□□□ -0.38
CHD1-202ENST00000414220 ARID1AO14497 2285 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 OR6C6A6NF89 314 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 ABHD16AO95870 558 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 SCG5P05408 212 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 ADRA2AP08913 450 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 ZNF23P17027 643 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 PRKACGP22612 351 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 RGS6P49758 472 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 SLC25A1P53007 311 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 ECH1Q13011 328 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 CCNIQ14094 377 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 GINS1Q14691 196 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 ELFN2Q5R3F8 820 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 ZFP1Q6P2D0 407 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 TMEM179BQ7Z7N9 219 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 BIVMQ86UB2 503 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 CYB561A3Q8NBI2 242 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 SLC26A10Q8NG04 563 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 OR5L1Q8NGL2 311 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 OR4Q3Q8NH05 313 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 OR1F12Q8NHA8 337 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 OTULINQ96BN8 352 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 SYT3Q9BQG1 590 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 MRPL37Q9BZE1 423 aaKnown RBP12.66□□□□□ -0.38
CHD1-202ENST00000414220 HDHD2Q9H0R4 259 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 FN3KQ9H479 309 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 TBCCD1Q9NVR7 557 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 GRIP1Q9Y3R0 1128 aa12.66□□□□□ -0.38
CHD1-202ENST00000414220 CSMD1Q96PZ7 3565 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 LOC100509620A0A075B734 347 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 PLSCR5A0PG75 271 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 PRR23D1E9PI22 279 aaPredicted RBP12.65□□□□□ -0.38
CHD1-202ENST00000414220 H3BSA7 217 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 H7C1Q1 480 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 J3QW42 95 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 NDUFS8O00217 210 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 DCTN6O00399 190 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 NDUFS7O75251 213 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 IGFBP1P08833 259 aaPredicted RBP12.65□□□□□ -0.38
CHD1-202ENST00000414220 INHBBP09529 407 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 PRR23D2P0DMB1 279 aaPredicted RBP12.65□□□□□ -0.38
CHD1-202ENST00000414220 GAAP10253 952 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 ZNF250P15622 560 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 SLC25A16P16260 332 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 LIPAP38571 399 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 PDLIM4P50479 330 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 ESRRGP62508 458 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 CRMP1Q14194 572 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 TMEM154Q6P9G4 183 aa12.65□□□□□ -0.38
CHD1-202ENST00000414220 VASH1Q7L8A9 365 aaPredicted RBP12.65□□□□□ -0.38
CHD1-202ENST00000414220 HS3ST5Q8IZT8 346 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms