RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 A8MXQ7 604 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 H0YCG3 227 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 RGS16O15492 202 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 SHOX2O60902 331 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 SPAG6O75602 509 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 TNFSF13O75888 250 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 ATP5LO75964 103 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 DIRAS1O95057 198 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 OPN1MWP04001 364 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 CAPN1P07384 714 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 SMIM10L2AP0DMW4 78 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 SMIM10L2BP0DMW5 78 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 OPN1MW2P0DN77 364 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 OPN1MW3P0DN78 364 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 MCF2P10911 925 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 PCMT1P22061 227 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 OPRD1P41143 372 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 GPM6AP51674 278 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 SUCLG1P53597 346 aaKnown RBP2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 KRTAP10-8P60410 259 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 HERVK_113P61574 105 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 EBI3Q14213 229 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 PDK3Q15120 406 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 EXOC3L2Q2M3D2 409 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 KLHL38Q2WGJ6 581 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 TNFAIP8L3Q5GJ75 292 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 TFDP3Q5H9I0 405 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 CFAP157Q5JU67 520 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 GPR157Q5UAW9 335 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 DUPD1Q68J44 220 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 OR4F3Q6IEY1 312 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 IGFL3Q6UXB1 125 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 CD300LGQ6UXG3 332 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 Q6ZN92 141 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZNF620Q6ZNG0 422 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 Q6ZPB1 254 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 GET4Q7L5D6 327 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 PEX26Q7Z412 305 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 C6orf120Q7Z4R8 191 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 FAM228AQ86W67 206 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 SLC13A5Q86YT5 568 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 CD302Q8IX05 232 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 TMEM61Q8N0U2 210 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 IQCKQ8N0W5 287 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 EIF1ADQ8N9N8 165 aaKnown RBP2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 OR52H1Q8NGJ2 320 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 JOSD2Q8TAC2 188 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 FGF14Q92915 247 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 IFT74Q96LB3 600 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 CLCC1Q96S66 551 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 NAT9Q9BTE0 207 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 SLC17A9Q9BYT1 436 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 YY1AP1Q9H869 796 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 SIAEQ9HAT2 523 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 DMAP1Q9NPF5 467 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 CISHQ9NSE2 258 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 UVRAGQ9P2Y5 699 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 SEC14L3Q9UDX4 400 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 COL4A2P08572 1712 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 HTTP42858 3142 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 MYO18AQ92614 2054 aaKnown RBP2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 hCG_1818297A0A087WSY0 165 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 MIF4GDA9UHW6 222 aaKnown RBP2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 HSD17B6O14756 317 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 SLC31A2O15432 143 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 RIPK2O43353 540 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 PSTPIP1O43586 416 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 PROSCO94903 275 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 LSM8O95777 96 aaKnown RBP2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 KRT14P02533 472 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 FGGP02679 453 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 C1QAP02745 245 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 SHBGP04278 402 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 GIPP09681 153 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 CCR1P32246 355 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 CDKN2BP42772 138 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 CCT3P49368 545 aaKnown RBP2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 CRISP3P54108 245 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 TNNC1P63316 161 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 CCNA1P78396 465 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 BEX3Q00994 111 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 KIAA0087Q14695 138 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 CYTH1Q15438 398 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 LRRC10Q5BKY1 277 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 TSPO2Q5TGU0 170 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 FRMPD2BQ6IN97 320 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 ALKAL1Q6UXT8 129 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZNF621Q6ZSS3 439 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZNF546Q86UE3 836 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZBTB8OSQ8IWT0 167 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 KATNAL2Q8IYT4 538 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 SYCE1Q8N0S2 351 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZNF606Q8WXB4 792 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 TLCD1Q96CP7 247 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 RBM14Q96PK6 669 aaKnown RBP2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 SLC38A2Q96QD8 506 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 PKMYT1Q99640 499 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 ACTR6Q9GZN1 396 aa2.32□□□□□ -2.04
HMGB1P11-201ENST00000413899 SRMSQ9H3Y6 488 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms