RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 F5H5K5 113 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 CDK2AP1O14519 115 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 SYT7O43581 403 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 CD1EP15812 388 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 CXADRP78310 365 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 FXNQ16595 210 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 MRPL21Q7Z2W9 205 aaKnown RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 Q8N402 240 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 NUP37Q8NFH4 326 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 NDNFQ8TB73 568 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 IL22RA2Q969J5 263 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 TCEAL7Q9BRU2 100 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 FN3KRPQ9HA64 309 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 MEPEQ9NQ76 525 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 SLC2A9Q9NRM0 540 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 MKI67P46013 3256 aaKnown RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 FAM230AA0A1W2PPH8 454 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 M0R129 80 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF593O00488 134 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 TCAPO15273 167 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 ACTL6AO96019 429 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 UCHL1P09936 223 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 MZT1Q08AG7 82 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 ECH1Q13011 328 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 PCOLCEQ15113 449 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 RNPS1Q15287 305 aaKnown RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 GLB1L2Q8IW92 636 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 FAM109AQ8N4B1 249 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 GJC3Q8NFK1 279 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 ADGRG7Q96K78 797 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 QPCTLQ9NXS2 382 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 FOXJ2Q9P0K8 574 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 KLHL13Q9P2N7 655 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 KCNN3Q9UGI6 736 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 YTHDF2Q9Y5A9 579 aaKnown RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 TECTAO75443 2155 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 ACACAQ13085 2346 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 EEF1E1-BLOC1S5C9J1V9 151 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 EEF1E1O43324 174 aaKnown RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 COX6A1P12074 109 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 APEHP13798 732 aaKnown RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 PTBP1P26599 531 aaKnown RBP eCLIP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 CDNFQ49AH0 187 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 TP53I3Q53FA7 332 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 PLA2G2CQ5R387 149 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 SAMD12Q8N8I0 201 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 OR13C3Q8NGS6 347 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 OR13G1Q8NGZ3 307 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF596Q8TC21 504 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 RASD2Q96D21 266 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 MALSU1Q96EH3 234 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 TRIB1Q96RU8 372 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 PPA2Q9H2U2 334 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 BEX1Q9HBH7 125 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 SLC52A3Q9NQ40 469 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 KCNG2Q9UJ96 466 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 HHLA2Q9UM44 414 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 PROCRQ9UNN8 238 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 RP1P56715 2156 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 BORCS7-ASMTA0A0B4J1R7 106 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 H7C1C5 153 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 ADAM11O75078 769 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 SP1P08047 785 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 LIFP15018 202 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 PGAM2P15259 253 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 NBL1P41271 181 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 OR3A3P47888 321 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 OR3A2P47893 321 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 LIMK1P53667 647 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 LCN6P62502 163 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 CFHR1Q03591 330 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 MYBPHQ13203 477 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 GPR50Q13585 617 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 AVPI1Q5T686 147 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 SPINK14Q6IE38 97 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 MRPL14Q6P1L8 145 aaKnown RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 PAQR6Q6TCH4 344 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 CBLN3Q6UW01 205 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 LACC1Q8IV20 430 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 GTPBP8Q8N3Z3 284 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 ZSCAN4Q8NAM6 433 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 BLNKQ8WV28 456 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 GPA33Q99795 319 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 TSPAN10Q9H1Z9 355 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 OR51E2Q9H255 320 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 IFT46Q9NQC8 304 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 ABRACLQ9P1F3 81 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF346Q9UL40 294 aaKnown RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 CFAP54Q96N23 3096 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 IGKV3D-11A0A0A0MRZ8 115 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 E9PI62 339 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 TSPAN15O95858 294 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 IFNA5P01569 189 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 ZFP36L2P47974 494 aaKnown RBP7.69□□□□□ -1.18
SYNE1-211ENST00000413186 DIO1P49895 249 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 GZMMP51124 257 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 SPCS2Q15005 226 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 CDK10Q15131 360 aa7.69□□□□□ -1.18
SYNE1-211ENST00000413186 SMN1Q16637 294 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms