RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 EMC9Q9Y3B6 208 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 ENTPD2Q9Y5L3 495 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 COL4A5P29400 1685 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 PRAMEF27A3QJZ7 478 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 RNH1P13489 461 aaKnown RBP12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 PAX6P26367 422 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 EGR3Q06889 387 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 PPA1Q15181 289 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 AWAT1Q58HT5 328 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 TMEFF1Q8IYR6 380 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 MYO16Q9Y6X6 1858 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 TRIP12Q14669 1992 aaPredicted RBP12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 RALGAPA2Q2PPJ7 1873 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 TGM5O43548 720 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 APODP05090 189 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 ZGLP1P0C6A0 271 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 RCBTB1Q8NDN9 531 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 OR56B1Q8NGI3 324 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 SECTM1Q8WVN6 248 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 OR8D2Q9GZM6 311 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 RBM7Q9Y580 266 aaKnown RBP12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 SBF1O95248 1867 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 A0A1W2PQ45 241 aaPredicted RBP12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 A0A1W2PQY0 241 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 IFNA5P01569 189 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 MFGE8Q08431 387 aaPredicted RBP12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 GUK1Q16774 197 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 OR2B11Q5JQS5 317 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 JMJD6Q6NYC1 403 aaPredicted RBP12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 SLC22A24Q8N4F4 322 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 ZNF283Q8N7M2 679 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 C2orf50Q96LR7 162 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 B3GALT1Q9Y5Z6 326 aa12.63□□□□□ -0.39
CLTCL1-201ENST00000412649 NSA2O95478 260 aaKnown RBP12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 CRHP06850 196 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 HTRA3P83110 453 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 HNRNPA1L2Q32P51 320 aaKnown RBP12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 RPUSD3Q6P087 351 aaKnown RBP12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 SCGB1C1Q8TD33 95 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 ARRDC3Q96B67 414 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 SPACA7Q96KW9 195 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 SYT3Q9BQG1 590 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 COPS7AQ9UBW8 275 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 ZMIZ1Q9ULJ6 1067 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 ATXN7L1Q9ULK2 861 aaPredicted RBP12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 MAFFQ9ULX9 164 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 SLC22A13Q9Y226 551 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 LCTP09848 1927 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 SERINC4A6NH21 518 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 TBPP20226 339 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 SLC22A6Q4U2R8 563 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 COMTD1Q86VU5 262 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 EXD3Q8N9H8 876 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 SGIP1Q9BQI5 828 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 ZDHHC4Q9NPG8 344 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 POMT1Q9Y6A1 747 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 MYLKQ15746 1914 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 TMEM272A0A1B0GTI8 110 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 C7orf77A4D0Y5 90 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 PI3P19957 117 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 C5AR1P21730 350 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 AKT2P31751 481 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 GAS1P54826 345 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 TMEM128Q5BJH2 165 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 COMMD1Q8N668 190 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 OR5AP2Q8NGF4 316 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 LINC00615Q96LM1 132 aaPredicted RBP12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 TEX101Q9BY14 249 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 HRASLS2Q9NWW9 162 aa12.62□□□□□ -0.39
CLTCL1-201ENST00000412649 DUS4LO95620 317 aaKnown RBP12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 F10P00742 488 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 IFNA1P01562 189 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 PGCP20142 388 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 ZNF610Q8N9Z0 462 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 PLPP5Q8NEB5 264 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 NKX3-1Q99801 234 aaPredicted RBP12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 SLC5A7Q9GZV3 580 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 PRDM7Q9NQW5 492 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 CCL26Q9Y258 94 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 RHBDD3Q9Y3P4 386 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 A0A087WV62 115 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 A0A0B4J2E0 115 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 A0A1B0GX12 115 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 BTBD17A6NE02 478 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 HSPB2A8KAH6 182 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 HSPB2Q16082 182 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 ZNF761Q86XN6 746 aaPredicted RBP12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 RFLNBQ8N5W9 214 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 TMEM59Q9BXS4 323 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 RHOP08100 348 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 FXYD4P59646 89 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 SERTAD2Q14140 314 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 MIDNQ504T8 468 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 EXOSC6Q5RKV6 272 aaKnown RBP12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 RBMS3Q6XE24 437 aaKnown RBP12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 RAB39BQ96DA2 213 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 MMP24Q9Y5R2 645 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 MGAMO43451 1857 aa12.61□□□□□ -0.39
CLTCL1-201ENST00000412649 A0A1B0GTH9 108 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms