RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 ATP23Q9Y6H3 246 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 MYO9AB2RTY4 2548 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 SGCEO43556 437 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 PRKYO43930 277 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 ATE1O95260 518 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 RAF1P04049 648 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 DANCRP0C864 163 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 ZNF823P16415 610 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 SLC2A5P22732 501 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 NR4A1P22736 598 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 APEX1P27695 318 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 APLNRP35414 380 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 TRIP10Q15642 601 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 TEX30Q5JUR7 227 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 SLC35D3Q5M8T2 416 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 SLC18B1Q6NT16 456 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 ZNF544Q6NX49 715 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 VASH1Q7L8A9 365 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 CXXC5Q7LFL8 322 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 CDH24Q86UP0 819 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 ZNF511Q8NB15 262 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 OR6K6Q8NGW6 343 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 AKR7LQ8NHP1 331 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 SMAP2Q8WU79 429 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 OTULINQ96BN8 352 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 HRASLS5Q96KN8 279 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 POM121L2Q96KW2 1035 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 MARCH7Q9H992 704 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 C8orf4Q9NR00 106 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 CA10Q9NS85 328 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 FAIMQ9NVQ4 179 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 ATPIF1Q9UII2 106 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 POLR1DQ9Y2S0 133 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 COMMD3-BMI1R4GMX3 469 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 ARID1AO14497 2285 aa13.35□□□□□ -0.27
TRAPPC12-203ENST00000411973 LOC100509620A0A075B734 347 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 OR6C6A6NF89 314 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 TVP23AA6NH52 213 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 CASQ2O14958 399 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 RER1O15258 196 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 SYNGR3O43761 229 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 TLX2O43763 284 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 TMCC2O75069 709 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 CD53P19397 219 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 PCSK6P29122 969 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 GDI2P50395 445 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 ADAM8P78325 824 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 KEAP1Q14145 624 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 CCDC92Q53HC0 331 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 LYPD4Q6UWN0 246 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 PAQR4Q8N4S7 273 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 TCEANCQ8N8B7 351 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 TMEM163Q8TC26 289 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 MBD6Q96DN6 1003 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 RDH12Q96NR8 316 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 MBOAT4Q96T53 435 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 CDADC1Q9BWV3 514 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 OR51V1Q9H2C8 321 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 TOR3AQ9H497 397 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 ZNF442Q9H7R0 627 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 WDR76Q9H967 626 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 CDH20Q9HBT6 801 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 PLEK2Q9NYT0 353 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 NDRG4Q9ULP0 352 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 SPEF1Q9Y4P9 236 aa13.34□□□□□ -0.27
TRAPPC12-203ENST00000411973 CREBBPQ92793 2442 aa13.33□□□□□ -0.27
TRAPPC12-203ENST00000411973 ARFGEF3Q5TH69 2177 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 C5orf49A4QMS7 147 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 DOK2O60496 412 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 ICMTO60725 284 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 CCL2P13500 99 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 DNASE1P24855 282 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 GSTT1P30711 240 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 APOBEC3AP31941 199 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 TTKP33981 857 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 ENTPD1P49961 510 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 CDC42P60953 191 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 GALK2Q01415 458 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 RAB35Q15286 201 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 ZIK1Q3SY52 487 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 ELFN2Q5R3F8 820 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 AADACL4Q5VUY2 407 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 NXNL2Q5VZ03 156 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 CORO6Q6QEF8 472 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 DTX2Q86UW9 622 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 LINC00346Q8IVM7 164 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 PACRGLQ8N7B6 248 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 BBS1Q8NFJ9 593 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 OR8J1Q8NGP2 316 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 OR2AJ1Q8NGZ0 328 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 OR1F12Q8NHA8 337 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 TRUB1Q8WWH5 349 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 PIGTQ969N2 578 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 TEAD3Q99594 435 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 COQ7Q99807 217 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 HDHD2Q9H0R4 259 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 GDF2Q9UK05 429 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 PLEKHA6Q9Y2H5 1048 aa13.33□□□□□ -0.28
TRAPPC12-203ENST00000411973 USF3Q68DE3 2245 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms