RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SLC25A4P12235 298 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 NR0B1P51843 470 aaKnown RBP14.97□□□□□ -0.01
LIMS2-208ENST00000410011 UBE2MP61081 183 aaKnown RBP14.97□□□□□ -0.01
LIMS2-208ENST00000410011 RAP1BP61224 184 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 RAP1AP62834 184 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 SORDQ00796 357 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 PLCXD2Q0VAA5 305 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 MEF2DQ14814 521 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 TMEM81Q6P7N7 255 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 TFAP2EQ6VUC0 442 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 TTLL10Q6ZVT0 673 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 WWTR1Q9GZV5 400 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 KCNK15Q9H427 330 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 G6PC2Q9NQR9 355 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 DUX4Q9UBX2 424 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 ZNF736B4DX44 427 aaPredicted RBP14.97□□□□□ -0.01
LIMS2-208ENST00000410011 NUDT14O95848 222 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 PLGP00747 810 aaPredicted RBP14.97□□□□□ -0.01
LIMS2-208ENST00000410011 UBBP0CG47 229 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 UBCP0CG48 685 aaKnown RBP14.97□□□□□ -0.01
LIMS2-208ENST00000410011 CD96P40200 585 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 SLC26A5P58743 744 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 RPS27AP62979 156 aaKnown RBP14.97□□□□□ -0.01
LIMS2-208ENST00000410011 UBA52P62987 128 aaKnown RBP14.97□□□□□ -0.01
LIMS2-208ENST00000410011 PMPCAQ10713 525 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 ETFDHQ16134 617 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 TMEM244Q5VVB8 128 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 OR5M8Q8NGP6 311 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 OR1N1Q8NGS0 311 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 CHRDQ9H2X0 955 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 SLC2A4RGQ9NR83 387 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 RHBDD3Q9Y3P4 386 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 SLCO1B1Q9Y6L6 691 aa14.97□□□□□ -0.01
LIMS2-208ENST00000410011 D6RAR5 112 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 FTCDNL1E5RQL4 147 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 TRIM77I1YAP6 450 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 CDK2AP1O14519 115 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 SDC3O75056 442 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 AHSA1O95433 338 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 MAOBP27338 520 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 ABCD3P28288 659 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 OR1D4P47884 311 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 TDGQ13569 410 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 ATPAF1Q5TC12 328 aaPredicted RBP14.96□□□□□ -0.01
LIMS2-208ENST00000410011 POMZP3Q6PJE2 187 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 OGFOD3Q6PK18 319 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 DNM1P34Q6PK57 102 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 ZNF627Q7L945 461 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 ZNF248Q8NDW4 579 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 AQP3Q92482 292 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 C1QTNF6Q9BXI9 259 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 LDAHQ9H6V9 325 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 GPN3Q9UHW5 284 aaPredicted RBP14.96□□□□□ -0.01
LIMS2-208ENST00000410011 GTF2A1LQ9UNN4 478 aa14.96□□□□□ -0.01
LIMS2-208ENST00000410011 TDRD6O60522 2096 aaKnown RBP14.96□□□□□ -0.01
LIMS2-208ENST00000410011 CPAMD8Q8IZJ3 1885 aa14.96□□□□□ -0.02
LIMS2-208ENST00000410011 AMY2AP04746 511 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 DNASE1L1P49184 302 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 SLC29A4Q7RTT9 530 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 ZNF546Q86UE3 836 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 MISPQ8IVT2 679 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 GALNT16Q8N428 558 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 SLC26A10Q8NG04 563 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 TINAGL1Q9GZM7 467 aaPredicted RBP14.95□□□□□ -0.02
LIMS2-208ENST00000410011 COPS7AQ9UBW8 275 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 MSRAQ9UJ68 235 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 OR52A1Q9UKL2 312 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 RAB22AQ9UL26 194 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 COA3Q9Y2R0 106 aaPredicted RBP14.95□□□□□ -0.02
LIMS2-208ENST00000410011 THADAQ6YHU6 1953 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 DNAH14Q0VDD8 3507 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 RAD1O60671 282 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 OR2F2O95006 317 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 MMP16P51512 607 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 ZP2Q05996 745 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 OR2F1Q13607 317 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.95□□□□□ -0.02
LIMS2-208ENST00000410011 BEST3Q8N1M1 668 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 BPIFB2Q8N4F0 458 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 KCNRGQ8N5I3 272 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 OR13C3Q8NGS6 347 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 ST7LQ8TDW4 575 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 PRRT1Q99946 306 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 NRSN2Q9GZP1 204 aa14.95□□□□□ -0.02
LIMS2-208ENST00000410011 CDC14CA4D256 554 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 OR14I1A6ND48 311 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 METTL21EPA6NDL7 271 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 OR5H14A6NHG9 310 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 DISC1C4P0D8 188 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 WISP1O95388 367 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 NAGAP17050 411 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 DHRS2Q13268 280 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 NR0B2Q15466 257 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 FAHD2BQ6P2I3 314 aaPredicted RBP14.94□□□□□ -0.02
LIMS2-208ENST00000410011 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.94□□□□□ -0.02
LIMS2-208ENST00000410011 STEAP2Q8NFT2 490 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 OR13C8Q8NGS7 320 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 LMX1AQ8TE12 382 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 TMEM234Q8WY98 164 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 FAHD2AQ96GK7 314 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms