RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 NANOS3P60323 173 aaKnown RBP4.89□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF404Q494X3 552 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 PHYHD1Q5SRE7 291 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 LIPNQ5VXI9 398 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 DEGS2Q6QHC5 323 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 ARL9Q6T311 187 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 UNQ9370/PRO34162Q6UXP9 181 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 FCRLAQ7L513 359 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 UBQLNLQ8IYU4 475 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 MEIOBQ8N635 442 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 OR6Q1Q8NGQ2 317 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 C11orf40Q8WZ69 217 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 PNPLA2Q96AD5 504 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF845Q96IR2 970 aaPredicted RBP4.89□□□□□ -1.63
EPHA4-202ENST00000409854 MAP6Q96JE9 813 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 FOXN4Q96NZ1 517 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 BARHL1Q9BZE3 327 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 KCNN2Q9H2S1 579 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 MMP27Q9H306 513 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 SLCO1C1Q9NYB5 712 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 CYB5R1Q9UHQ9 305 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 GSTK1Q9Y2Q3 226 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 AKAP13Q12802 2813 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 CEP250Q9BV73 2442 aa4.89□□□□□ -1.63
EPHA4-202ENST00000409854 CNOT1A5YKK6 2376 aaKnown RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ST8SIA5O15466 376 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ITGB2P05107 769 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 QDPRP09417 244 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF823P16415 610 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 NTF4P34130 210 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 CSNK1A1P48729 337 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SELENOPP49908 381 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 CCR9P51686 369 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ALKBH1Q13686 389 aaKnown RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 EIF2B1Q14232 305 aaKnown RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 KCTD18Q6PI47 426 aaPredicted RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 LRRC69Q6ZNQ3 347 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 YIPF7Q8N8F6 280 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 OR8H1Q8NGG4 311 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ABHD4Q8TB40 342 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 THEM6Q8WUY1 208 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 RNF133Q8WVZ7 376 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ROBO4Q8WZ75 1007 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 GHSRQ92847 366 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SLC25A46Q96AG3 418 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 NABP1Q96AH0 204 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 HDHD5Q9BXW7 423 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 AKIP1Q9NQ31 210 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 POLE4Q9NR33 117 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 PLSCR2Q9NRY7 297 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SPRR3Q9UBC9 169 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 LHFPL6Q9Y693 200 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 NCOA6Q14686 2063 aaPredicted RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ALPK2Q86TB3 2170 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ZFHX4Q86UP3 3567 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 RIF1Q5UIP0 2472 aaKnown RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 TRGV5A0A0B4J1U4 118 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 TRBV2A0A0J9YWF9 115 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SHISA3A0PJX4 238 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 CD8B2A6NJW9 211 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 DVL2O14641 736 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SERPINA3P01011 423 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 CD8BP10966 210 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 EDNRAP25101 427 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 DCTDP32321 178 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 PSMB10P40306 273 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 MTNR1BP49286 362 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ARHGDIBP52566 201 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 LSM6P62312 80 aaKnown RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SLC3A1Q07837 685 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 INSL4Q14641 139 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 YIF1BQ5BJH7 314 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 CLVS2Q5SYC1 327 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 CARD17Q5XLA6 110 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 BEND4Q6ZU67 534 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 CDH26Q8IXH8 852 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 MCFD2Q8NI22 146 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 HSD17B8Q92506 261 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 RGP1Q92546 391 aaPredicted RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 PHYHIPQ92561 330 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 NSMAFQ92636 917 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 WDYHV1Q96HA8 205 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 C6orf62Q9GZU0 229 aaPredicted RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 PRDM14Q9GZV8 571 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 BCO1Q9HAY6 547 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 FRRS1LQ9P0K9 344 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 PFDN2Q9UHV9 154 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 NUP50Q9UKX7 468 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 B3GNT3Q9Y2A9 372 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SPEF1Q9Y4P9 236 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 LRP12Q9Y561 859 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 TRBV5-5A0A0J9YX44 114 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 IQCMA0A1B0GVH7 501 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 FAM172BPA6NC97 362 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 OR4C45A6NMZ5 311 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF724A8MTY0 619 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 PSMD9O00233 223 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SLC43A1O75387 559 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 GATBO75879 557 aaKnown RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ZFPL1O95159 310 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms