RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ADIPOQQ15848 244 aa19.3■□□□□ 0.68
PTCD3-203ENST00000409783 LINC01590Q5TEZ4 76 aa19.3■□□□□ 0.68
PTCD3-203ENST00000409783 AGAP6Q5VW22 663 aa19.3■□□□□ 0.68
PTCD3-203ENST00000409783 LYPD4Q6UWN0 246 aa19.3■□□□□ 0.68
PTCD3-203ENST00000409783 FBXL14Q8N1E6 418 aa19.3■□□□□ 0.68
PTCD3-203ENST00000409783 PROKR2Q8NFJ6 384 aa19.3■□□□□ 0.68
PTCD3-203ENST00000409783 MED20Q9H944 212 aa19.3■□□□□ 0.68
PTCD3-203ENST00000409783 CBLN4Q9NTU7 201 aa19.3■□□□□ 0.68
PTCD3-203ENST00000409783 FAIMQ9NVQ4 179 aa19.3■□□□□ 0.68
PTCD3-203ENST00000409783 GPRIN2O60269 458 aa19.29■□□□□ 0.68
PTCD3-203ENST00000409783 COX5BP10606 129 aa19.29■□□□□ 0.68
PTCD3-203ENST00000409783 IGFBP5P24593 272 aa19.29■□□□□ 0.68
PTCD3-203ENST00000409783 APLNRP35414 380 aa19.29■□□□□ 0.68
PTCD3-203ENST00000409783 SWI5Q1ZZU3 235 aa19.29■□□□□ 0.68
PTCD3-203ENST00000409783 TBC1D28Q2M2D7 210 aa19.29■□□□□ 0.68
PTCD3-203ENST00000409783 CCDC92Q53HC0 331 aaPredicted RBP19.29■□□□□ 0.68
PTCD3-203ENST00000409783 VASH1Q7L8A9 365 aaPredicted RBP19.29■□□□□ 0.68
PTCD3-203ENST00000409783 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.29■□□□□ 0.68
PTCD3-203ENST00000409783 PQLC1Q8N2U9 271 aa19.29■□□□□ 0.68
PTCD3-203ENST00000409783 OR1J2Q8NGS2 313 aa19.29■□□□□ 0.68
PTCD3-203ENST00000409783 CDH20Q9HBT6 801 aa19.29■□□□□ 0.68
PTCD3-203ENST00000409783 ZAR1LA6NP61 321 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 RER1O15258 196 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 SGCEO43556 437 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 SYNGR3O43761 229 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 ALPLP05186 524 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 PSKH1P11801 424 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 GLRXP35754 106 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 SLX4IPQ5VYV7 408 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 VHLLQ6RSH7 139 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 KRTAP1-3Q8IUG1 177 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 ALDH16A1Q8IZ83 802 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 LRRC75A-AS1Q8N1F1 130 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 RBM4BQ9BQ04 359 aaKnown RBP19.28■□□□□ 0.68
PTCD3-203ENST00000409783 GSX2Q9BZM3 304 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 HINT3Q9NQE9 182 aaKnown RBP19.28■□□□□ 0.68
PTCD3-203ENST00000409783 USE1Q9NZ43 259 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 CYB5R1Q9UHQ9 305 aa19.28■□□□□ 0.68
PTCD3-203ENST00000409783 OR6C6A6NF89 314 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 TVP23AA6NH52 213 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 DOK2O60496 412 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 ICMTO60725 284 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 SMPD2O60906 423 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 OR4A8P0C604 315 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 PCSK6P29122 969 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 POLR2IP36954 125 aaKnown RBP19.27■□□□□ 0.68
PTCD3-203ENST00000409783 SERPINF1P36955 418 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 WNT5AP41221 380 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 EFNB3Q15768 340 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 SLC18B1Q6NT16 456 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 CORO6Q6QEF8 472 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 ZNF511Q8NB15 262 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 GABARAPL3Q9BY60 117 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 CXorf56Q9H5V9 222 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 SPEF1Q9Y4P9 236 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 COMMD3-BMI1R4GMX3 469 aa19.27■□□□□ 0.68
PTCD3-203ENST00000409783 TMEM129A0AVI4 362 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 C5orf49A4QMS7 147 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 EI24O14681 340 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 HLA-DQA2P01906 255 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 FAM157BP0CG42 384 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 CDKN1AP38936 164 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 PTH2RP49190 550 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 GDI2P50395 445 aaKnown RBP19.26■□□□□ 0.67
PTCD3-203ENST00000409783 EFNB1P98172 346 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 GALK2Q01415 458 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 PCK2Q16822 640 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 C12orf73Q69YU5 71 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 PLBD1Q6P4A8 553 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 CPOQ8IVL8 374 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 LINC00346Q8IVM7 164 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 ZNF101Q8IZC7 436 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 GJC3Q8NFK1 279 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 OR10H5Q8NGA6 315 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 WDR76Q9H967 626 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 PLEK2Q9NYT0 353 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 TVP23BQ9NYZ1 205 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 KCNG2Q9UJ96 466 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 POLR1DQ9Y2S0 133 aa19.26■□□□□ 0.67
PTCD3-203ENST00000409783 PRR23D1E9PI22 279 aaPredicted RBP19.25■□□□□ 0.67
PTCD3-203ENST00000409783 PRR23D2P0DMB1 279 aaPredicted RBP19.25■□□□□ 0.67
PTCD3-203ENST00000409783 FMO3P31513 532 aa19.25■□□□□ 0.67
PTCD3-203ENST00000409783 UCP2P55851 309 aa19.25■□□□□ 0.67
PTCD3-203ENST00000409783 RAB35Q15286 201 aa19.25■□□□□ 0.67
PTCD3-203ENST00000409783 SNAPC1Q16533 368 aa19.25■□□□□ 0.67
PTCD3-203ENST00000409783 CFAP77Q6ZQR2 320 aa19.25■□□□□ 0.67
PTCD3-203ENST00000409783 BBS1Q8NFJ9 593 aa19.25■□□□□ 0.67
PTCD3-203ENST00000409783 OR1F12Q8NHA8 337 aa19.25■□□□□ 0.67
PTCD3-203ENST00000409783 PLK3Q9H4B4 646 aa19.25■□□□□ 0.67
PTCD3-203ENST00000409783 MARCH7Q9H992 704 aa19.25■□□□□ 0.67
PTCD3-203ENST00000409783 PNRC2Q9NPJ4 139 aaKnown RBP19.25■□□□□ 0.67
PTCD3-203ENST00000409783 ENOPH1Q9UHY7 261 aa19.25■□□□□ 0.67
PTCD3-203ENST00000409783 ATPIF1Q9UII2 106 aa19.25■□□□□ 0.67
PTCD3-203ENST00000409783 GDF2Q9UK05 429 aaPredicted RBP19.25■□□□□ 0.67
PTCD3-203ENST00000409783 NDRG4Q9ULP0 352 aaKnown RBP19.25■□□□□ 0.67
PTCD3-203ENST00000409783 B9A039 149 aa19.24■□□□□ 0.67
PTCD3-203ENST00000409783 E9PQ18 207 aa19.24■□□□□ 0.67
PTCD3-203ENST00000409783 PRKYO43930 277 aa19.24■□□□□ 0.67
PTCD3-203ENST00000409783 GLCEO94923 617 aa19.24■□□□□ 0.67
PTCD3-203ENST00000409783 PAICSP22234 425 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms