RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 TIGD3Q6B0B8 471 aa17.91■□□□□ 0.46
USP39-204ENST00000409766 CT55Q8WUE5 264 aa17.91■□□□□ 0.46
USP39-204ENST00000409766 GCDHQ92947 438 aaPredicted RBP17.91■□□□□ 0.46
USP39-204ENST00000409766 ZNF486Q96H40 463 aaPredicted RBP17.91■□□□□ 0.46
USP39-204ENST00000409766 CENPMQ9NSP4 180 aa17.91■□□□□ 0.46
USP39-204ENST00000409766 HHLA2Q9UM44 414 aa17.91■□□□□ 0.46
USP39-204ENST00000409766 PHF3Q92576 2039 aaKnown RBP17.9■□□□□ 0.46
USP39-204ENST00000409766 IGFBP3P17936 291 aaPredicted RBP17.9■□□□□ 0.46
USP39-204ENST00000409766 PLA2G7Q13093 441 aa17.9■□□□□ 0.46
USP39-204ENST00000409766 CHAF1BQ13112 559 aa17.9■□□□□ 0.46
USP39-204ENST00000409766 MFAP5Q13361 173 aa17.9■□□□□ 0.46
USP39-204ENST00000409766 SLC25A47Q6Q0C1 308 aa17.9■□□□□ 0.46
USP39-204ENST00000409766 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.9■□□□□ 0.46
USP39-204ENST00000409766 OR52I2Q8NH67 350 aa17.9■□□□□ 0.46
USP39-204ENST00000409766 SLAMF6Q96DU3 332 aa17.9■□□□□ 0.46
USP39-204ENST00000409766 DMRTB1Q96MA1 342 aa17.9■□□□□ 0.46
USP39-204ENST00000409766 FYTTD1Q96QD9 318 aaKnown RBP17.9■□□□□ 0.46
USP39-204ENST00000409766 TAAR9Q96RI9 348 aa17.9■□□□□ 0.46
USP39-204ENST00000409766 DDX28Q9NUL7 540 aaKnown RBP17.9■□□□□ 0.46
USP39-204ENST00000409766 RBMX2Q9Y388 322 aaKnown RBP17.9■□□□□ 0.46
USP39-204ENST00000409766 A0A1W2PPL8 197 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 OR2M5A3KFT3 312 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 TCRBP04435 133 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 ICAM2P13598 275 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 FSTP19883 344 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 ACHEP22303 614 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 GIFP27352 417 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 AVPR2P30518 371 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 SNTB2Q13425 540 aaKnown RBP17.89■□□□□ 0.46
USP39-204ENST00000409766 FAM166AQ6J272 317 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 ZNF704Q6ZNC4 412 aaPredicted RBP17.89■□□□□ 0.46
USP39-204ENST00000409766 OR10S1Q8NGN2 331 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 SGCZQ96LD1 299 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 JSRP1Q96MG2 331 aaPredicted RBP17.89■□□□□ 0.46
USP39-204ENST00000409766 BEX2Q9BXY8 128 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 SPRY4Q9C004 299 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 C1orf198Q9H425 327 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 RYDENQ9NUL5 291 aaKnown RBP17.89■□□□□ 0.46
USP39-204ENST00000409766 NUDT15Q9NV35 164 aa17.89■□□□□ 0.46
USP39-204ENST00000409766 FREM2Q5SZK8 3169 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 LOC107986453A0A1B0GWG9 222 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 SLC17A2O00624 439 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 EIF1AYO14602 144 aaKnown RBP17.89■□□□□ 0.45
USP39-204ENST00000409766 TPPPO94811 219 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 TMIGD3P0DMS9 266 aaPredicted RBP17.89■□□□□ 0.45
USP39-204ENST00000409766 CD59P13987 128 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 DCTDP32321 178 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 MRPS10P82664 201 aaKnown RBP17.89■□□□□ 0.45
USP39-204ENST00000409766 CD83Q01151 205 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 SSPNQ14714 243 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 RAET1LQ5VY80 246 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 CARD17Q5XLA6 110 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 OR51D1Q8NGF3 324 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 FCAMRQ8WWV6 532 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 TMEM41AQ96HV5 264 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 DDA1Q9BW61 102 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 CACNG6Q9BXT2 260 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 FAM206AQ9NX38 181 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 COPZ2Q9P299 210 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 CKLFQ9UBR5 152 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 NUBP2Q9Y5Y2 271 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 LHFPL6Q9Y693 200 aa17.89■□□□□ 0.45
USP39-204ENST00000409766 DOK2O60496 412 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 CBR3O75828 277 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 HPP00738 406 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 MT-ND4P03905 459 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 CD37P11049 281 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 EIF1AXP47813 144 aaKnown RBP17.88■□□□□ 0.45
USP39-204ENST00000409766 CLDN6P56747 220 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 TAS2R20P59543 309 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 RRAS2P62070 204 aaPredicted RBP17.88■□□□□ 0.45
USP39-204ENST00000409766 OR13C3Q8NGS6 347 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 SEC61A2Q9H9S3 476 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 TAS2R4Q9NYW5 299 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 DKKL1Q9UK85 242 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 FARSAQ9Y285 508 aaKnown RBP17.88■□□□□ 0.45
USP39-204ENST00000409766 TRAV6A0A075B6T7 132 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 LOC101059948A0A1B0GTJ6 334 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 ZNF726A6NNF4 738 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 ATP6V1G1O75348 118 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 KRT33AO76009 404 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 UBCP0CG48 685 aaKnown RBP17.88■□□□□ 0.45
USP39-204ENST00000409766 ZNF17P17021 662 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 CDAP32320 146 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 BCL2L15Q5TBC7 163 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 TMEM244Q5VVB8 128 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 H3F3CQ6NXT2 135 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 CFAP77Q6ZQR2 320 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 PLPP7Q8NBV4 271 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 C15orf40Q8WUR7 153 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 PCSK5Q92824 1860 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 OR2B2Q9GZK3 357 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 EMC7Q9NPA0 242 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 KLK11Q9UBX7 282 aa17.88■□□□□ 0.45
USP39-204ENST00000409766 CDX4O14627 284 aaPredicted RBP17.87■□□□□ 0.45
USP39-204ENST00000409766 XRCC3O43542 346 aa17.87■□□□□ 0.45
USP39-204ENST00000409766 POU3F4P49335 361 aa17.87■□□□□ 0.45
USP39-204ENST00000409766 CCR6P51684 374 aa17.87■□□□□ 0.45
USP39-204ENST00000409766 RAB11BQ15907 218 aa17.87■□□□□ 0.45
USP39-204ENST00000409766 ANKRD16Q6P6B7 361 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms