RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 H7C1C5 153 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 J3QLI3 93 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 CDC42EP2O14613 210 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 TIMM8AO60220 97 aaPredicted RBP12.52□□□□□ -0.41
CBX3-203ENST00000409747 DOK2O60496 412 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 CD55P08174 381 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 TNFSF4P23510 183 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 GATA3P23771 443 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 LCN6P62502 163 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 MTX3Q5HYI7 312 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 GPR139Q6DWJ6 353 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 C8orf82Q6P1X6 216 aaPredicted RBP12.52□□□□□ -0.41
CBX3-203ENST00000409747 CMTM5Q96DZ9 223 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 G6PC2Q9NQR9 355 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 TBCCD1Q9NVR7 557 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 ZNF446Q9NWS9 450 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 GMPR2Q9P2T1 348 aaKnown RBP12.52□□□□□ -0.41
CBX3-203ENST00000409747 CACNG2Q9Y698 323 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 TEX13CA0A0J9YWL9 993 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 A0A1W2PRQ8 180 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 SGCEO43556 437 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 PLPP2O43688 288 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 DEAF1O75398 565 aaPredicted RBP12.51□□□□□ -0.41
CBX3-203ENST00000409747 NDUFB2O95178 105 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 NGFP01138 241 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 H1F0P07305 194 aaKnown RBP12.51□□□□□ -0.41
CBX3-203ENST00000409747 FUT4P22083 530 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 MDH1P40925 334 aaKnown RBP12.51□□□□□ -0.41
CBX3-203ENST00000409747 HTR5AP47898 357 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 AQP6Q13520 282 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 DGCR6Q14129 220 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 MESTQ5EB52 335 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 TBPL2Q6SJ96 375 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 FAM122BQ7Z309 247 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 SLC7A13Q8TCU3 470 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 Q96M85 177 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 EMC7Q9NPA0 242 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 ABCD2Q9UBJ2 740 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 TANC2Q9HCD6 1990 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 ISPDA4D126 451 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 GMNNO75496 209 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 UBOX5O94941 541 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 SDHAP31040 664 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 KRR1Q13601 381 aaKnown RBP12.51□□□□□ -0.41
CBX3-203ENST00000409747 TMEM255AQ5JRV8 349 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 FGD3Q5JSP0 725 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 DCAF12L2Q5VW00 463 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 ADCK1Q86TW2 530 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 TREML1Q86YW5 311 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 FAM46AQ96IP4 442 aaKnown RBP12.51□□□□□ -0.41
CBX3-203ENST00000409747 GPX7Q96SL4 187 aaPredicted RBP12.51□□□□□ -0.41
CBX3-203ENST00000409747 KLHL21Q9UJP4 597 aa12.51□□□□□ -0.41
CBX3-203ENST00000409747 SAMD4AQ9UPU9 718 aaKnown RBP12.51□□□□□ -0.41
CBX3-203ENST00000409747 J3QW42 95 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 RHCEP18577 417 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 TNFRSF1AP19438 455 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 EPHA1P21709 976 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 LSM6P62312 80 aaKnown RBP12.5□□□□□ -0.41
CBX3-203ENST00000409747 TNFAIP6P98066 277 aaPredicted RBP12.5□□□□□ -0.41
CBX3-203ENST00000409747 USP43Q70EL4 1123 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 VASH1Q7L8A9 365 aaPredicted RBP12.5□□□□□ -0.41
CBX3-203ENST00000409747 GLB1L2Q8IW92 636 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 SEMA6DQ8NFY4 1073 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 ST7LQ8TDW4 575 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 JMJD8Q96S16 334 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 MSL2Q9HCI7 577 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 SPAG4Q9NPE6 437 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 PLEK2Q9NYT0 353 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 ATPIF1Q9UII2 106 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 SIGLEC7Q9Y286 467 aa12.5□□□□□ -0.41
CBX3-203ENST00000409747 KHDRBS3O75525 346 aaKnown RBP12.49□□□□□ -0.41
CBX3-203ENST00000409747 SCG5P05408 212 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 NCK1P16333 377 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 CTLA4P16410 223 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 ZNF26P17031 533 aaPredicted RBP12.49□□□□□ -0.41
CBX3-203ENST00000409747 KITLGP21583 273 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 LIMS1P48059 325 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 PSG7Q13046 419 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 CDK5R2Q13319 367 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 KRT72Q14CN4 511 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 THSD4Q6ZMP0 1018 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 C1QL2Q7Z5L3 287 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 RSRC1Q96IZ7 334 aaKnown RBP12.49□□□□□ -0.41
CBX3-203ENST00000409747 SYT4Q9H2B2 425 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 NRIP3Q9NQ35 241 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 VSX1Q9NZR4 365 aaPredicted RBP12.49□□□□□ -0.41
CBX3-203ENST00000409747 NDUFAF4Q9P032 175 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 PURGQ9UJV8 347 aaKnown RBP12.49□□□□□ -0.41
CBX3-203ENST00000409747 PCDHB10Q9UN67 800 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 AURKCQ9UQB9 309 aa12.49□□□□□ -0.41
CBX3-203ENST00000409747 LOC105371242A0A075B767 164 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 SURF4O15260 269 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 SLC16A7O60669 478 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 VENTXO95231 258 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 RGS6P49758 472 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 RPS6KA3P51812 740 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 PSME3P61289 254 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 PGM2L1Q6PCE3 622 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 DNM1P34Q6PK57 102 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 DPY19L2P2Q6ZN68 376 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms