RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 LINC01590Q5TEZ4 76 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 C12orf73Q69YU5 71 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 PLBD1Q6P4A8 553 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 DTX2Q86UW9 622 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 PAQR4Q8N4S7 273 aaPredicted RBP17.55■□□□□ 0.4
PTCD3-202ENST00000409326 OTULINQ96BN8 352 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 MBD6Q96DN6 1003 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 POM121L2Q96KW2 1035 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 RIBC2Q9H4K1 309 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 ZNF442Q9H7R0 627 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 CDH20Q9HBT6 801 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 HINT3Q9NQE9 182 aaKnown RBP17.55■□□□□ 0.4
PTCD3-202ENST00000409326 SPEF1Q9Y4P9 236 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 ORC6Q9Y5N6 252 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 ARFGEF3Q5TH69 2177 aa17.55■□□□□ 0.4
PTCD3-202ENST00000409326 MYO9AB2RTY4 2548 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 ARID1AO14497 2285 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 TMCC2O75069 709 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 COX5BP10606 129 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 ZNF823P16415 610 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 FMO3P31513 532 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 APOBEC3AP31941 199 aaPredicted RBP17.54■□□□□ 0.4
PTCD3-202ENST00000409326 GGT2P36268 569 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 HIST1H3AP68431 136 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 SNTB2Q13425 540 aaKnown RBP17.54■□□□□ 0.4
PTCD3-202ENST00000409326 HIST2H3PS2Q5TEC6 136 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 KRT80Q6KB66 452 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 LYPD4Q6UWN0 246 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 HIST2H3AQ71DI3 136 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 VASH1Q7L8A9 365 aaPredicted RBP17.54■□□□□ 0.4
PTCD3-202ENST00000409326 CPOQ8IVL8 374 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 FBXL14Q8N1E6 418 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 MUC15Q8N387 334 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 GJC3Q8NFK1 279 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 OR6K6Q8NGW6 343 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 EME1Q96AY2 570 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 PLEK2Q9NYT0 353 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 CYB5R1Q9UHQ9 305 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 NDRG4Q9ULP0 352 aaKnown RBP17.54■□□□□ 0.4
PTCD3-202ENST00000409326 LAMP3Q9UQV4 416 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 COMMD3-BMI1R4GMX3 469 aa17.54■□□□□ 0.4
PTCD3-202ENST00000409326 LOC100509620A0A075B734 347 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 TVP23AA6NH52 213 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 RER1O15258 196 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 PRODHO43272 600 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 GLCEO94923 617 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 ANPEPP15144 967 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 POLR2IP36954 125 aaKnown RBP17.53■□□□□ 0.4
PTCD3-202ENST00000409326 GDI2P50395 445 aaKnown RBP17.53■□□□□ 0.4
PTCD3-202ENST00000409326 RAD23AP54725 363 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 ADAM8P78325 824 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 RAB35Q15286 201 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 CCDC92Q53HC0 331 aaPredicted RBP17.53■□□□□ 0.4
PTCD3-202ENST00000409326 AGAP6Q5VW22 663 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 SLC18B1Q6NT16 456 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 CORO6Q6QEF8 472 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 VHLLQ6RSH7 139 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 ZBTB49Q6ZSB9 765 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 CXXC5Q7LFL8 322 aaKnown RBP17.53■□□□□ 0.4
PTCD3-202ENST00000409326 LINC00346Q8IVM7 164 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 TMEM171Q8WVE6 324 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 TRAF4Q9BUZ4 470 aaPredicted RBP17.53■□□□□ 0.4
PTCD3-202ENST00000409326 CDADC1Q9BWV3 514 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 GRIP2Q9C0E4 1043 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 OR51V1Q9H2C8 321 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 BEX4Q9NWD9 120 aaPredicted RBP17.53■□□□□ 0.4
PTCD3-202ENST00000409326 ATPIF1Q9UII2 106 aa17.53■□□□□ 0.4
PTCD3-202ENST00000409326 USF3Q68DE3 2245 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 C5orf49A4QMS7 147 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 OR6C6A6NF89 314 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 SYNGR3O43761 229 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 PRKYO43930 277 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 CCNOP22674 350 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 PCSK6P29122 969 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 THBS4P35443 961 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 GLRXP35754 106 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 HTR5AP47898 357 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 ELF3P78545 371 aaPredicted RBP17.52■□□□□ 0.4
PTCD3-202ENST00000409326 DEFB113Q30KQ7 82 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 ZNF511Q8NB15 262 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 SLC29A1Q99808 456 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 HDHD2Q9H0R4 259 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 WDR76Q9H967 626 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 CBLN4Q9NTU7 201 aa17.52■□□□□ 0.4
PTCD3-202ENST00000409326 GDF2Q9UK05 429 aaPredicted RBP17.52■□□□□ 0.4
PTCD3-202ENST00000409326 CD8AP01732 235 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 SLC2A5P22732 501 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 PRRC2AP48634 2157 aaKnown RBP17.51■□□□□ 0.39
PTCD3-202ENST00000409326 ENTPD1P49961 510 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 RPS23P62266 143 aaKnown RBP17.51■□□□□ 0.39
PTCD3-202ENST00000409326 EFNB1P98172 346 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 ADIPOQQ15848 244 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 PCK2Q16822 640 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 SLC35D3Q5M8T2 416 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 C11orf71Q6IPW1 123 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 CFAP77Q6ZQR2 320 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 BBS1Q8NFJ9 593 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 OR2AJ1Q8NGZ0 328 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 OR1F12Q8NHA8 337 aa17.51■□□□□ 0.39
PTCD3-202ENST00000409326 CXorf56Q9H5V9 222 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms