RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 HNRNPA1P09651 372 aaKnown RBP eCLIP7.52□□□□□ -1.21
SNX13-201ENST00000409076 IFNGR1P15260 489 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 HTR2CP28335 458 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 CSNK1EP49674 416 aaKnown RBP7.52□□□□□ -1.21
SNX13-201ENST00000409076 ZNF658BQ4V348 819 aaPredicted RBP7.52□□□□□ -1.21
SNX13-201ENST00000409076 ETV3LQ6ZN32 361 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 RASGRP3Q8IV61 690 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 ZNF283Q8N7M2 679 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 S100A13Q99584 98 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 FSCN3Q9NQT6 498 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 SLC22A11Q9NSA0 550 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 CHRNA9Q9UGM1 479 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 PILRAQ9UKJ1 303 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 DOCK10Q96BY6 2186 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 TMEM272A0A1B0GTI8 110 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 LOC107986453A0A1B0GWG9 222 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 C7orf66A4D0T2 115 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 E9PQ18 207 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 DPP4P27487 766 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 FGL1Q08830 312 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 POU4F2Q12837 409 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 CLINT1Q14677 625 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 KIR2DS3Q14952 304 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 CLLU1Q5K131 121 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 RPL13AP3Q6NVV1 102 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 FJX1Q86VR8 437 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 SUMF1Q8NBK3 374 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 ADAD2Q8NCV1 583 aaKnown RBP7.52□□□□□ -1.21
SNX13-201ENST00000409076 CD300LFQ8TDQ1 290 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 PIGTQ969N2 578 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 ARL5BQ96KC2 179 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 CRB3Q9BUF7 120 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 DUSP15Q9H1R2 295 aaPredicted RBP7.52□□□□□ -1.21
SNX13-201ENST00000409076 FBRSQ9HAH7 460 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 PCDHB16Q9NRJ7 776 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 SLC17A4Q9Y2C5 497 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 SYT7O43581 403 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 CTAG2O75638 210 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 NAT2P11245 290 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 RPA2P15927 270 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 PPP1R1AQ13522 171 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 TRAM1Q15629 374 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 GUCA2BQ16661 112 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 EEF1A1P5Q5VTE0 462 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 RNF113BQ8IZP6 322 aaKnown RBP7.51□□□□□ -1.21
SNX13-201ENST00000409076 BHLHE23Q8NDY6 225 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 SLC26A10Q8NG04 563 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 OR14A16Q8NHC5 309 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 SLC39A7Q92504 469 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 KLHDC7BQ96G42 594 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 SOSTQ9BQB4 213 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 NICN1Q9BSH3 213 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 ANKRD19PQ9H560 264 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 APMAPQ9HDC9 416 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 ISYNA1Q9NPH2 558 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 SLC2A4RGQ9NR83 387 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 IGHV5-51A0A0C4DH38 117 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 K7EQS6 105 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 CYR61O00622 381 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 PTP4A3O75365 173 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 IGHV3-9P01782 118 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 ERCC1P07992 297 aaPredicted RBP7.51□□□□□ -1.21
SNX13-201ENST00000409076 SNRNP70P08621 437 aaKnown RBP7.51□□□□□ -1.21
SNX13-201ENST00000409076 OMGP23515 440 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 PPT1P50897 306 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 OR1D5P58170 312 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 PDZD11Q5EBL8 140 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 DPY19L2P2Q6ZN68 376 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 NUP54Q7Z3B4 507 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 C19orf47Q8N9M1 422 aaKnown RBP7.51□□□□□ -1.21
SNX13-201ENST00000409076 OR51E1Q8TCB6 317 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 MARC2Q969Z3 335 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 CCDC74AQ96AQ1 378 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 HAVCR1Q96D42 359 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 POTEKPQ9BYX7 375 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 OPN4Q9UHM6 478 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 CD207Q9UJ71 328 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 CSAG2Q9Y5P2 127 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 TEX13DA0A0J9YY54 714 aaPredicted RBP7.51□□□□□ -1.21
SNX13-201ENST00000409076 KLF4O43474 513 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 S100A6P06703 90 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 THBS1P07996 1170 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 MAPK3P27361 379 aaPredicted RBP7.51□□□□□ -1.21
SNX13-201ENST00000409076 SERPINF1P36955 418 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 RAB38P57729 211 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 SP6Q3SY56 376 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 P4HA3Q7Z4N8 544 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 CPEB2Q7Z5Q1 589 aaKnown RBP7.51□□□□□ -1.21
SNX13-201ENST00000409076 PRSS35Q8N3Z0 413 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 OR1J4Q8NGS1 313 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 BAHD1Q8TBE0 780 aaPredicted RBP7.51□□□□□ -1.21
SNX13-201ENST00000409076 ISOC2Q96AB3 205 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 GPHA2Q96T91 129 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 CMSS1Q9BQ75 279 aaKnown RBP7.51□□□□□ -1.21
SNX13-201ENST00000409076 G6PC3Q9BUM1 346 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 PIPOXQ9P0Z9 390 aa7.51□□□□□ -1.21
SNX13-201ENST00000409076 HEATR1Q9H583 2144 aaKnown RBP7.5□□□□□ -1.21
SNX13-201ENST00000409076 PRR14LQ5THK1 2151 aa7.5□□□□□ -1.21
SNX13-201ENST00000409076 H3BMH7 237 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms