RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ZADH2Q8N4Q0 377 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF519Q8TB69 540 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 ELP5Q8TE02 316 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 PDCD1LG2Q9BQ51 273 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 PPIL3Q9H2H8 161 aaKnown RBP11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 EMC3Q9P0I2 261 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 NLKQ9UBE8 527 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 AK6Q9Y3D8 172 aaKnown RBP11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 POLEQ07864 2286 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 TRBV11-1A0A0K0K1C0 115 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 ANXA2P2A6NMY6 339 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 NPIPA5E9PKD4 350 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 C11orf98E9PRG8 122 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 GPR171O14626 319 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 TP53I11O14683 189 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 SSX4O60224 188 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 UPK3AO75631 287 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 ANXA2P07355 339 aaKnown RBP11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 OR8G3PP0DMU2 310 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 ZNF823P16415 610 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 ATF1P18846 271 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 ERP29P30040 261 aaKnown RBP11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 MNDAP41218 407 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 RIDAP52758 137 aaKnown RBP11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 GLO1Q04760 184 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 GPR176Q14439 515 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 TOMM34Q15785 309 aaPredicted RBP11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 ACKR1Q16570 336 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 NTRK2Q16620 822 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 GXYLT1Q4G148 440 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 POMZP3Q6PJE2 187 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 DEGS2Q6QHC5 323 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 H1FNTQ75WM6 255 aaPredicted RBP11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 ZNF227Q86WZ6 799 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 ZNF679Q8IYX0 411 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 DND1Q8IYX4 353 aaKnown RBP11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 GHDCQ8N2G8 530 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 ST6GALNAC3Q8NDV1 305 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 OR2G2Q8NGZ5 317 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 ZPLD1Q8TCW7 415 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 SMAP2Q8WU79 429 aaPredicted RBP11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 AKAP1Q92667 903 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 ST6GAL2Q96JF0 529 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 MRGPRX4Q96LA9 322 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 OR8B4Q96RC9 309 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 PTDSS2Q9BVG9 487 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 DEFB126Q9BYW3 111 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 TTTY10Q9BZA0 68 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 SYT4Q9H2B2 425 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 NIPAL2Q9H841 368 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 PLEKHA1Q9HB21 404 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 B3GAT2Q9NPZ5 323 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 PPP4R1LQ9P1A2 415 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 MRM2Q9UI43 246 aaKnown RBP11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 NPIPA1Q9UND3 350 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 N6AMT1Q9Y5N5 214 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 NAV3Q8IVL0 2385 aa11.52□□□□□ -0.57
SMARCB1-203ENST00000407082 SVILO95425 2214 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 CELSR1Q9NYQ6 3014 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 IGLV3-32A0A0A0MS00 114 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 MEGF11A6BM72 1044 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 FAM171A2A8MVW0 826 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 GABARAPH6UMI1 98 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 ZNF593O00488 134 aaPredicted RBP11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 EEF1E1O43324 174 aaKnown RBP11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 SNAPC5O75971 98 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 RPP14O95059 124 aaKnown RBP11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 ZFPL1O95159 310 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 CD2P06729 351 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 FAM157BP0CG42 384 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 SNRPBP14678 240 aaKnown RBP11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 ART1P52961 327 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 RRAS2P62070 204 aaPredicted RBP11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 ROM1Q03395 351 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 PUDPQ08623 228 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 MAB21L1Q13394 359 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 SLC17A1Q14916 467 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 KRTAP21-3Q3LHN1 58 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 SLC25A53Q5H9E4 307 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 KRT74Q7RTS7 529 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 DPY19L4Q7Z388 723 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 KRT77Q7Z794 578 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 NOXA1Q86UR1 476 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 LIX1LQ8IVB5 337 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 PM20D2Q8IYS1 436 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 RFLNBQ8N5W9 214 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 ZNF433Q8N7K0 673 aaPredicted RBP11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 ADPRHL1Q8NDY3 354 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 OR13C5Q8NGS8 318 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 THAP3Q8WTV1 239 aaPredicted RBP11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 SMIM4Q8WVI0 70 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 ZNRF4Q8WWF5 429 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 FCAMRQ8WWV6 532 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 PSMF1Q92530 271 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 HGDQ93099 445 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 TRIM63Q969Q1 353 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 PTTG3PQ9NZH4 202 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 KLHL9Q9P2J3 617 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 CKLFQ9UBR5 152 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 B3GALT5Q9Y2C3 310 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms