RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 SLC25A24Q6NUK1 477 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 TMEM81Q6P7N7 255 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 FOXRED2Q8IWF2 684 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 OR11G2Q8NGC1 345 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 GRPEL2Q8TAA5 225 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 OR51J1Q9H342 316 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 MRPS18AQ9NVS2 196 aaKnown RBP12.62□□□□□ -0.39
SCAF4-202ENST00000399804 TBC1D24Q9ULP9 559 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 HMX3A6NHT5 357 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 TFP02787 698 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 SERPINA2P20848 420 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 AVPR2P30518 371 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 ZNF93P35789 620 aaPredicted RBP12.61□□□□□ -0.39
SCAF4-202ENST00000399804 GLP1RP43220 463 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 VEGFCP49767 419 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 CLPPQ16740 277 aaPredicted RBP12.61□□□□□ -0.39
SCAF4-202ENST00000399804 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.61□□□□□ -0.39
SCAF4-202ENST00000399804 CD163Q86VB7 1156 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 NAXDQ8IW45 347 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 OR6M1Q8NGM8 313 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 CPT1CQ8TCG5 803 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 NANOS1Q8WY41 292 aaKnown RBP12.61□□□□□ -0.39
SCAF4-202ENST00000399804 L7N2F9 121 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 SCGNO76038 276 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 CELA2AP08217 269 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 APLNRP35414 380 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 ETV6P41212 452 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 CXADRP78310 365 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 TRIP6Q15654 476 aaKnown RBP12.61□□□□□ -0.39
SCAF4-202ENST00000399804 STK11Q15831 433 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 SSX6Q7RTT6 188 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 OR2T35Q8NGX2 323 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 C17orf50Q8WW18 174 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 C7orf50Q9BRJ6 194 aaKnown RBP12.61□□□□□ -0.39
SCAF4-202ENST00000399804 ST6GALNAC5Q9BVH7 336 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 SELENOIQ9C0D9 397 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 CDH20Q9HBT6 801 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 GDF2Q9UK05 429 aaPredicted RBP12.61□□□□□ -0.39
SCAF4-202ENST00000399804 RHBDD3Q9Y3P4 386 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 RAD51DO75771 328 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 IGKV3-11P04433 115 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 SERPINA5P05154 406 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 SERPINA7P05543 415 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 AKAIN1P0CW23 69 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 CX3CR1P49238 355 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 SNRPD2P62316 118 aaKnown RBP12.61□□□□□ -0.39
SCAF4-202ENST00000399804 SPIN3Q5JUX0 258 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 HACD4Q5VWC8 232 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 SLC38A9Q8NBW4 561 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 ZPLD1Q8TCW7 415 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 SPACA5Q96QH8 159 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 NOX3Q9HBY0 568 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 FBXL2Q9UKC9 423 aa12.61□□□□□ -0.39
SCAF4-202ENST00000399804 C14orf166Q9Y224 244 aaKnown RBP12.61□□□□□ -0.39
SCAF4-202ENST00000399804 A6NLC8 198 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 DHHO43323 396 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 SGCEO43556 437 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 AKR1C4P17516 323 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ALOX5APP20292 161 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 MTCP1P56278 107 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 DGCR2P98153 550 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 OR8H3Q8N146 312 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 SLC22A24Q8N4F4 322 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 FAM181AQ8N9Y4 354 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 AKIRIN1Q9H9L7 192 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-202ENST00000399804 PLEKHJ1Q9NW61 149 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ETV7Q9Y603 341 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 R4GMQ9 66 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 LOC100289279A0A1B0GTE1 492 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ZNF850A8MQ14 1090 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 HSPA12AO43301 675 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 SSX4O60224 188 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 FCGR2AP12318 317 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ATF1P18846 271 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 CCR6P51684 374 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 SLC36A2Q495M3 483 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 CDONQ4KMG0 1287 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ANGPTL5Q86XS5 388 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 CMTM4Q8IZR5 234 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 CSNK2A3Q8NEV1 391 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ZNF845Q96IR2 970 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-202ENST00000399804 WDR54Q9H977 334 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 KLF13Q9Y2Y9 288 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-202ENST00000399804 LRP12Q9Y561 859 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ANKRD34CP0C6C1 535 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 CCL3P10147 92 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 GABRR1P24046 479 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 GRB2P62993 217 aaKnown RBP12.6□□□□□ -0.39
SCAF4-202ENST00000399804 MC2RQ01718 297 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 SLC10A1Q14973 349 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 INPP5JQ15735 1006 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-202ENST00000399804 DMRTC1Q5HYR2 192 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ZNF574Q6ZN55 896 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-202ENST00000399804 TRMT61AQ96FX7 289 aaKnown RBP12.6□□□□□ -0.39
SCAF4-202ENST00000399804 C12orf49Q9H741 205 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 MRPS28Q9Y2Q9 187 aaKnown RBP12.6□□□□□ -0.39
SCAF4-202ENST00000399804 TRAV1-2A0A0B4J238 106 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 OR2M5A3KFT3 312 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 TP53P04637 393 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ABOP16442 354 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms