RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 OR2AT4A6NND4 320 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 EFCAB7A8K855 629 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 FCN1O00602 326 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TNFSF14O43557 240 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF806P0C7X5 589 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 SDHAP31040 664 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 RNASE10Q5GAN6 216 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 PTPMT1Q8WUK0 201 aaPredicted RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 MAFIPQ8WZ33 124 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ZBTB8AQ96BR9 441 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 SCMH1Q96GD3 660 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 LAT2Q9GZY6 243 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 EPHA6Q9UF33 1036 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF749O43361 778 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 PPP3CBP16298 524 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 UBE2IP63279 158 aaKnown RBP4.46□□□□□ -1.69
SMAD4-202ENST00000398417 RELBQ01201 579 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 SLC36A2Q495M3 483 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 SIGIRRQ6IA17 410 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 C17orf107Q6ZR85 190 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 BPHLQ86WA6 291 aaPredicted RBP4.46□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF584Q8IVC4 421 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF808Q8N4W9 903 aaPredicted RBP4.46□□□□□ -1.69
SMAD4-202ENST00000398417 FAM71CQ8NEG0 241 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 OR4K17Q8NGC6 315 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 RAB24Q969Q5 203 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 FAM3DQ96BQ1 224 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF587Q96SQ5 575 aaPredicted RBP4.46□□□□□ -1.69
SMAD4-202ENST00000398417 KLHDC3Q9BQ90 382 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 MARVELD1Q9BSK0 173 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 MED29Q9NX70 200 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 SERTAD3Q9UJW9 196 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 PCOLCE2Q9UKZ9 415 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 TDRD15B5MCY1 1934 aaKnown RBP4.46□□□□□ -1.69
SMAD4-202ENST00000398417 ARHGAP32A7KAX9 2087 aa4.46□□□□□ -1.69
SMAD4-202ENST00000398417 BET1O15155 118 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 DNPH1O43598 174 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 SC5DO75845 299 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 MPIG6BO95866 241 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 RAF1P04049 648 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 RPS18P62269 152 aaKnown RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 PRTGQ2VWP7 1150 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 MANEAQ5SRI9 462 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 C1orf140Q5VVS0 124 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 B3GNTL1Q67FW5 361 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 ARMC10Q8N2F6 343 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 NPEPL1Q8NDH3 523 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 OR6N1Q8NGY5 312 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 CCDC107Q8WV48 283 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 ATOH1Q92858 354 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF649Q9BS31 505 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 KIF25Q9UIL4 384 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 LEUTXA8MZ59 168 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 BGLAPP02818 100 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 RAB40ALP0C0E4 278 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 IL9P15248 144 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 RPS4Y1P22090 263 aaKnown RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 ACHEP22303 614 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 HTR2CP28335 458 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 HSD11B1P28845 292 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 RPL13AP40429 203 aaKnown RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 SLC6A8P48029 635 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 CLRN1P58418 232 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 CORO6Q6QEF8 472 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 C3P1Q6ZMU1 363 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 OR14A16Q8NHC5 309 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 SMIM4Q8WVI0 70 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 RAB40AQ8WXH6 277 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 DAZLQ92904 295 aaKnown RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF775Q96BV0 537 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 SMIM19Q96E16 107 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 APMAPQ9HDC9 416 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 MMP25Q9NPA2 562 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 CLEC1BQ9P126 229 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 CHRNA9Q9UGM1 479 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 LOC102723971A0A1B0GUV8 181 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 G3V3Y1 287 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 PYCARD-AS1I3L0S3 204 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 LIMK1P53667 647 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 S100A10P60903 97 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 POU3F1Q03052 451 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 SLC17A1Q14916 467 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF485Q8NCK3 441 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 CXorf58Q96LI9 332 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 C4orf45Q96LM5 186 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 WDR77Q9BQA1 342 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 EMC6Q9BV81 110 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 PBDC1Q9BVG4 233 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 SERINC1Q9NRX5 453 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 HIF3AQ9Y2N7 669 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 IGHV5-51A0A0C4DH38 117 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 SYT7O43581 403 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 GSTZ1O43708 216 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 RP2O75695 350 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 NSA2O95478 260 aaKnown RBP4.46□□□□□ -1.7
SMAD4-202ENST00000398417 HLA-DQB1P01920 261 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 APOC3P02656 99 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 IGHV4-34P06331 123 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 IL11P20809 199 aa4.46□□□□□ -1.7
SMAD4-202ENST00000398417 NFYAP23511 347 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms