RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 FAM210AQ96ND0 272 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 SFTPA1Q8IWL2 248 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 DTWD2Q8NBA8 298 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 KCNJ16Q9NPI9 418 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 C19orf12Q9NSK7 152 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 ASB1Q9Y576 335 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 SYT5O00445 386 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 NID1P14543 1247 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 RPS16P62249 146 aaKnown RBP10.34□□□□□ -0.75
TTC28-201ENST00000397906 OTUD1Q5VV17 481 aaPredicted RBP10.34□□□□□ -0.75
TTC28-201ENST00000397906 RGS7BPQ6MZT1 257 aaPredicted RBP10.34□□□□□ -0.75
TTC28-201ENST00000397906 RPL3LQ92901 407 aaKnown RBP10.34□□□□□ -0.75
TTC28-201ENST00000397906 OR5M11Q96RB7 305 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 IL21Q9HBE4 155 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 CLEC2DQ9UHP7 191 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 PPICP45877 212 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 HAAOP46952 286 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 GPM6AP51674 278 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 RPL18Q07020 188 aaKnown RBP10.34□□□□□ -0.75
TTC28-201ENST00000397906 DOK3Q7L591 496 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 SSX4O60224 188 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 LOC100289279A0A1B0GTE1 492 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 RAC1P63000 192 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 MTCH1Q9NZJ7 389 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 GDNFP39905 211 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 ING1Q9UK53 422 aaPredicted RBP10.33□□□□□ -0.76
TTC28-201ENST00000397906 CTDSP2O14595 271 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 IGFBP1P08833 259 aaPredicted RBP10.33□□□□□ -0.76
TTC28-201ENST00000397906 LAIR1Q6GTX8 287 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 CD300LGQ6UXG3 332 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 LGI1O95970 557 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 NFYAP23511 347 aaPredicted RBP10.33□□□□□ -0.76
TTC28-201ENST00000397906 SLC43A2Q8N370 569 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 POFUT1Q9H488 388 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 TRGV5A0A0B4J1U4 118 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 LOC107986453A0A1B0GWG9 222 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 PRAF2O60831 178 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 FOXF1Q12946 379 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 HTR4Q13639 388 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 POU4F3Q15319 338 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 RTL8BQ17RB0 113 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 C1orf87Q8N0U7 546 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 FAM213BQ8TBF2 198 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 NAGAP17050 411 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.33□□□□□ -0.76
TTC28-201ENST00000397906 CATSPERDQ86XM0 798 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 IGHV5-51A0A0C4DH38 117 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 GLI4P10075 376 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 GPR12P47775 334 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 TBCEQ15813 527 aaPredicted RBP10.33□□□□□ -0.76
TTC28-201ENST00000397906 ZNF419Q96HQ0 510 aaPredicted RBP10.33□□□□□ -0.76
TTC28-201ENST00000397906 CENPOQ9BU64 300 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 CNTNAP3Q9BZ76 1288 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 LAT2Q9GZY6 243 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 CD300AQ9UGN4 299 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 STRCQ7RTU9 1775 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 FCMRO60667 390 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 CR2P20023 1033 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 SRP14P37108 136 aaKnown RBP10.33□□□□□ -0.76
TTC28-201ENST00000397906 ADGRF3Q8IZF5 1079 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 NKAIN3Q8N8D7 197 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 SOD1P00441 154 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 NRASP01111 189 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 CELA2BP08218 269 aaPredicted RBP10.33□□□□□ -0.76
TTC28-201ENST00000397906 OR2Z1Q8NG97 314 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 UBE2FQ969M7 185 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 GLTPQ9NZD2 209 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 SLC17A4Q9Y2C5 497 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 MEX3AA1L020 520 aaKnown RBP10.33□□□□□ -0.76
TTC28-201ENST00000397906 GPRIN2O60269 458 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 VAMP5O95183 116 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 SDHAP31040 664 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.33□□□□□ -0.76
TTC28-201ENST00000397906 OR56B4Q8NH76 319 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 OXGR1Q96P68 337 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 UHRF2Q96PU4 802 aa10.33□□□□□ -0.76
TTC28-201ENST00000397906 FBXL2Q9UKC9 423 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 COPS3Q9UNS2 423 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 SNRNP70P08621 437 aaKnown RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 HBG1P69891 147 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 HBG2P69892 147 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 P4HTMQ9NXG6 502 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 ZNF816-ZNF321PA0A0X1KG74 233 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 FADS1O60427 444 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 MRPS14O60783 128 aaKnown RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 ZDHHC11BP0C7U3 371 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 PLK5Q496M5 336 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 ZNF321PQ8N8H1 164 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 SPACA9Q96E40 222 aaPredicted RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 NAA50Q9GZZ1 169 aaKnown RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 ZNF705FA8MVS1 300 aaPredicted RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 MAGEB4O15481 346 aaPredicted RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 PPIHO43447 177 aaKnown RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 SCG5P05408 212 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 ZNF705DP0CH99 300 aaPredicted RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 ZNF705BP0CI00 300 aaPredicted RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 ACSM1Q08AH1 577 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 LPCAT3Q6P1A2 487 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 PTRH1Q86Y79 214 aaKnown RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 AKR7LQ8NHP1 331 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms