RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 IGHG3P01860 377 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 SPI1P17947 270 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 SLC25A1P53007 311 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 RAP1BP61224 184 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 RRAS2P62070 204 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 RAP1AP62834 184 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 LGALS3BPQ08380 585 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 TNK1Q13470 666 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 PLEKHN1Q494U1 663 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 ZNF57Q68EA5 555 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 ZFAND1Q8TCF1 268 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 TRIM63Q969Q1 353 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 CPNE4Q96A23 557 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 UPRTQ96BW1 309 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 ZNF845Q96IR2 970 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 FYTTD1Q96QD9 318 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 THAP7Q9BT49 309 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 MARCH7Q9H992 704 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 PAQR5Q9NXK6 330 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 ABRACLQ9P1F3 81 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 SPRR3Q9UBC9 169 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 LHX6Q9UPM6 363 aa17.18■□□□□ 0.34
PDLIM2-204ENST00000397760 A0A0G2JMP0 313 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 A0A0X1KG70 313 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 A8MV72 311 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 J3QLW9 94 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 TRAF3IP2O43734 574 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 ARL6IP5O75915 188 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 ZNF19P17023 458 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 GZMKP49863 264 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 BIDP55957 195 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 CCDC58Q4VC31 144 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 SLC35D3Q5M8T2 416 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 FAM205BPQ63HN1 556 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 RPUSD3Q6P087 351 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 PM20D2Q8IYS1 436 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 OR4M2Q8NGB6 313 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 OR4M1Q8NGD0 313 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 OR51L1Q8NGJ5 315 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 ROBO4Q8WZ75 1007 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 TSSK2Q96PF2 358 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 EMC6Q9BV81 110 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 SYT4Q9H2B2 425 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 SRA1Q9HD15 236 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 ST6GALNAC2Q9UJ37 374 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 E9PI62 339 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 INMT-MINDY4F8WBC2 141 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 ARSBP15848 533 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 RAB3BP20337 219 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 PITPNAQ00169 270 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 CD83Q01151 205 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 HSF2Q03933 536 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 FAPQ12884 760 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 SLC17A1Q14916 467 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 PON3Q15166 354 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 POU4F3Q15319 338 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 ACSM3Q53FZ2 586 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 HSD17B12Q53GQ0 312 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 WDFY1Q8IWB7 410 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 UBE2J2Q8N2K1 259 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 EXD3Q8N9H8 876 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 ZNRF4Q8WWF5 429 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 WACQ9BTA9 647 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 HDHD2Q9H0R4 259 aa17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 PPIL3Q9H2H8 161 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 VSX1Q9NZR4 365 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-204ENST00000397760 NCOR2Q9Y618 2525 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 NPIPA2E9PIF3 369 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 NPIPA3F8WFD2 350 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 WISP2O76076 250 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 GBX2P52951 348 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 OR12D2P58182 307 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 SLC3A1Q07837 685 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 CDONQ4KMG0 1287 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 PLA1AQ53H76 456 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 EEF1A1P5Q5VTE0 462 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 SIAH3Q8IW03 269 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 YIPF7Q8N8F6 280 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 SAMD12Q8N8I0 201 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 AKAP1Q92667 903 aaKnown RBP eCLIP17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 SMIM19Q96E16 107 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 CNN2Q99439 309 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 SF3B5Q9BWJ5 86 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 ZNF71Q9NQZ8 489 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 MGAQ8IWI9 3026 aa17.16■□□□□ 0.34
PDLIM2-204ENST00000397760 SLC22A23A1A5C7 686 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 NOTOA8MTQ0 251 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 FAM171A2A8MVW0 826 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 DVL2O14641 736 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 EIF4EP06730 217 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 FAM87AP0C7U9 286 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 CPN1P15169 458 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 PYCR1P32322 319 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 MAB21L1Q13394 359 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 GPR176Q14439 515 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 C3AR1Q16581 482 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 LINC00303Q3SY05 128 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 RPL22L1Q6P5R6 122 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 CREB3L2Q70SY1 520 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 FCRLAQ7L513 359 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms