RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 C11orf44Q8N8P7 122 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 OR2Z1Q8NG97 314 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 AKR7LQ8NHP1 331 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 TBC1D15Q8TC07 691 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 ITLN1Q8WWA0 313 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 SSMEM1Q8WWF3 244 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 ASB10Q8WXI3 467 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 HIST1H2ACQ93077 130 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 NMD3Q96D46 503 aaKnown RBP7.84□□□□□ -1.15
NEDD9-203ENST00000397378 ITPKCQ96DU7 683 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 MAELQ96JY0 434 aaKnown RBP7.84□□□□□ -1.15
NEDD9-203ENST00000397378 C4orf45Q96LM5 186 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 ZNF607Q96SK3 696 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 MCHR1Q99705 422 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 PAIP2Q9BPZ3 127 aaKnown RBP7.84□□□□□ -1.15
NEDD9-203ENST00000397378 ZNF426Q9BUY5 554 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 TOR3AQ9H497 397 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 TMEM38AQ9H6F2 299 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 SSU72Q9NP77 194 aaKnown RBP7.84□□□□□ -1.15
NEDD9-203ENST00000397378 TUBG2Q9NRH3 451 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 GAR1Q9NY12 217 aaKnown RBP7.84□□□□□ -1.15
NEDD9-203ENST00000397378 STX18Q9P2W9 335 aaKnown RBP7.84□□□□□ -1.15
NEDD9-203ENST00000397378 SLC13A4Q9UKG4 626 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 UGT2A1Q9Y4X1 527 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 GMEB1Q9Y692 573 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 TENM2Q9NT68 2774 aa7.84□□□□□ -1.15
NEDD9-203ENST00000397378 A0A1W2PRG6 482 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 VGLL3A8MV65 326 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 MCIDASD6RGH6 385 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 TNFRSF13BO14836 293 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-203ENST00000397378 LYPD3O95274 346 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 RPS2P15880 293 aaKnown RBP7.83□□□□□ -1.16
NEDD9-203ENST00000397378 GSTM3P21266 225 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 PPIBP23284 216 aaKnown RBP7.83□□□□□ -1.16
NEDD9-203ENST00000397378 CDAP32320 146 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 DAP3P51398 398 aaKnown RBP7.83□□□□□ -1.16
NEDD9-203ENST00000397378 MMP16P51512 607 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 ERVK-25P63136 954 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 BST1Q10588 318 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 TAF11Q15544 211 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 LRIF1Q5T3J3 769 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 SLC27A4Q6P1M0 643 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 TTC33Q6PID6 262 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-203ENST00000397378 ARL9Q6T311 187 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 NANOGNBQ7Z5D8 188 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 ARMC8Q8IUR7 673 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 C10orf111Q8N326 155 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 FITM2Q8N6M3 262 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 GOLGA6L1Q8N7Z2 621 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 ZSCAN4Q8NAM6 433 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-203ENST00000397378 NPEPL1Q8NDH3 523 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 OR9I1Q8NGQ6 314 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 C10orf82Q8WW14 230 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 NEIL1Q96FI4 390 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-203ENST00000397378 MPP4Q96JB8 637 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 MAGEB18Q96M61 343 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 OR2V2Q96R30 315 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 NUDT16L1Q9BRJ7 211 aaKnown RBP7.83□□□□□ -1.16
NEDD9-203ENST00000397378 TMEM109Q9BVC6 243 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 OR2H1Q9GZK4 316 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 WNT5BQ9H1J7 359 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 TMEM165Q9HC07 324 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 GCM1Q9NP62 436 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 TBCCD1Q9NVR7 557 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 SLC25A37Q9NYZ2 338 aa7.83□□□□□ -1.16
NEDD9-203ENST00000397378 IGKV1D-43A0A0B4J1Z2 117 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 GMNCA6NCL1 334 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 NPIPB13A6NJU9 1138 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 NPIPB4C9JG80 1138 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 BLOC1S5-TXNDC5H3BN57 136 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 M0R3H8 397 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 SLC2A10O95528 541 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 THY1P04216 161 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 F13BP05160 661 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 CST2P09228 141 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 THRBP10828 461 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 UMPSP11172 480 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 NR2C1P13056 603 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 SLC6A2P23975 617 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 UGT2B15P54855 530 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 FGF12P61328 243 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 PCBD1P61457 104 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 RPL18Q07020 188 aaKnown RBP7.82□□□□□ -1.16
NEDD9-203ENST00000397378 SCARB2Q14108 478 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 HERPUD1Q15011 391 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 SGCAQ16586 387 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 TTMPQ5BVD1 217 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 ENTPD8Q5MY95 495 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 ARMC4Q5T2S8 1044 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 NXNQ6DKJ4 435 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 DHRS7BQ6IAN0 325 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-203ENST00000397378 SLC2A7Q6PXP3 512 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 SLC25A47Q6Q0C1 308 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 NLRC3Q7RTR2 1065 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 SYT9Q86SS6 491 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 PTOV1Q86YD1 416 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 MSRB3Q8IXL7 192 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 OR8B3Q8NGG8 313 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 ADAMTS16Q8TE57 1224 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 OR8B2Q96RD0 313 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms