RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 DCDP81605 110 aaKnown RBP8.28□□□□□ -1.08
CAPN3-206ENST00000397163 SSBP1Q04837 148 aaKnown RBP8.28□□□□□ -1.08
CAPN3-206ENST00000397163 PDGFRLQ15198 375 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 WDR38Q5JTN6 314 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 LPCAT3Q6P1A2 487 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 SSX9Q7RTT3 188 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 MISPQ8IVT2 679 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 GTPBP8Q8N3Z3 284 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-206ENST00000397163 RCBTB1Q8NDN9 531 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 MCHR2Q969V1 340 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 SPACA7Q96KW9 195 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 C4orf45Q96LM5 186 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 CNTNAP3BQ96NU0 1288 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 SLC17A9Q9BYT1 436 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 STARD5Q9NSY2 213 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 THAP10Q9P2Z0 257 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-206ENST00000397163 YBX2Q9Y2T7 364 aaKnown RBP8.28□□□□□ -1.08
CAPN3-206ENST00000397163 A0A1B0GTI1 187 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 SLC25A4P12235 298 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 ALOX5APP20292 161 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 CASRP41180 1078 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 ACTR1BP42025 376 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 KIR3DL2P43630 455 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 P2RY4P51582 365 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 SKP1P63208 163 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 RPS21P63220 83 aaKnown RBP8.27□□□□□ -1.08
CAPN3-206ENST00000397163 KIR2DS3Q14952 304 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 OR4C3Q8NH37 302 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 FAM3CQ92520 227 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 ANKRD9Q96BM1 317 aaPredicted RBP8.27□□□□□ -1.08
CAPN3-206ENST00000397163 MOGAT1Q96PD6 335 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 GPX7Q96SL4 187 aaPredicted RBP8.27□□□□□ -1.08
CAPN3-206ENST00000397163 INTS14Q96SY0 518 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 ELOVL3Q9HB03 270 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 SLC22A13Q9Y226 551 aa8.27□□□□□ -1.08
CAPN3-206ENST00000397163 IGKV1D-42A0A075B6H8 117 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 A0A0B4J2A0 478 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 SERINC4A6NH21 518 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 RDH16O75452 317 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 DCNP07585 359 aaKnown RBP8.27□□□□□ -1.09
CAPN3-206ENST00000397163 MELTFP08582 738 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 OR8U8P0C7N1 319 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 ABOP16442 354 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 AVPR2P30518 371 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 ADPRHP54922 357 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 ADAM8P78325 824 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF141Q15928 474 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 C3orf33Q6P1S2 294 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 SLC35D2Q76EJ3 337 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 CD163Q86VB7 1156 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 CA13Q8N1Q1 262 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 EXD3Q8N9H8 876 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 OR10H5Q8NGA6 315 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 OR1J4Q8NGS1 313 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 CCL4L1Q8NHW4 92 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 CASTOR1Q8WTX7 329 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 FOXN4Q96NZ1 517 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 AMELYQ99218 206 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 SYT4Q9H2B2 425 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 SEBOXQ9HB31 216 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-206ENST00000397163 CHMP1AQ9HD42 196 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-206ENST00000397163 Q9N2J8 555 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 UQCC1Q9NVA1 299 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 DCAF16Q9NXF7 216 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 SHPKQ9UHJ6 478 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 MSRAQ9UJ68 235 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 KCNG2Q9UJ96 466 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 TMEM14AQ9Y6G1 99 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 PRSS38A1L453 326 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 EEF1E1-BLOC1S5C9J1V9 151 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 HRKO00198 91 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 YIF1AO95070 293 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 RENP00797 406 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 SLC35E2P0CK97 266 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 ATXN8OSP0DMR3 200 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 EGR3Q06889 387 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 SRSF5Q13243 272 aaKnown RBP8.27□□□□□ -1.09
CAPN3-206ENST00000397163 GPR18Q14330 331 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF74Q16587 644 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 FAM78AQ5JUQ0 283 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 GLYATL3Q5SZD4 288 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 TMEM200AQ86VY9 491 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 PHOSPHO2Q8TCD6 241 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 DNAJA3Q96EY1 480 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 RBM14Q96PK6 669 aaKnown RBP8.27□□□□□ -1.09
CAPN3-206ENST00000397163 LMF2Q9BU23 707 aaKnown RBP8.27□□□□□ -1.09
CAPN3-206ENST00000397163 GGACTQ9BVM4 153 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 RPS10P5Q9NQ39 176 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 SLC17A5Q9NRA2 495 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 CGGBP1Q9UFW8 167 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-206ENST00000397163 HIF3AQ9Y2N7 669 aa8.27□□□□□ -1.09
CAPN3-206ENST00000397163 A0A1W2PPH5 198 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 KAT7O95251 611 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 HNRNPA1P09651 372 aaKnown RBP eCLIP8.26□□□□□ -1.09
CAPN3-206ENST00000397163 C5AR1P21730 350 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 CTNNB1P35222 781 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 MEP1BQ16820 701 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 VWA2Q5GFL6 755 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 ADAM5Q6NVV9 412 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 RHOUQ7L0Q8 258 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms