RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 DTX2Q86UW9 622 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 JAZF1Q86VZ6 243 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 LINC01560Q8TB33 94 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 TVP23BQ9NYZ1 205 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 TMEM129A0AVI4 362 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 PRR23D1E9PI22 279 aaPredicted RBP9.16□□□□□ -0.94
NUP98-205ENST00000397007 XKRYO14609 159 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 BAG2O95816 211 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 PRR23D2P0DMB1 279 aaPredicted RBP9.16□□□□□ -0.94
NUP98-205ENST00000397007 TNK1Q13470 666 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 ZNF813Q6ZN06 617 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 OR6N1Q8NGY5 312 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 LGALS12Q96DT0 336 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 DCLRE1CQ96SD1 692 aaKnown RBP9.16□□□□□ -0.94
NUP98-205ENST00000397007 DUSP21Q9H596 190 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 EMC7Q9NPA0 242 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 CLN6Q9NWW5 311 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 ZFHX3Q15911 3703 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 GYPBP06028 91 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 CDH2P19022 906 aaPredicted RBP9.15□□□□□ -0.94
NUP98-205ENST00000397007 ZNF84P51523 738 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 TGFBR3Q03167 851 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 APOFQ13790 326 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 GSG1Q2KHT4 349 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 ZIK1Q3SY52 487 aaPredicted RBP9.15□□□□□ -0.94
NUP98-205ENST00000397007 CDONQ4KMG0 1287 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 TTC23Q5W5X9 447 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 DEGS2Q6QHC5 323 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 ZNF442Q9H7R0 627 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 SLC22A31A6NKX4 558 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 TLX2O43763 284 aaPredicted RBP9.15□□□□□ -0.94
NUP98-205ENST00000397007 SELENOFO60613 162 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 SEC14L2O76054 403 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 CLIC3O95833 236 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 ACSM4P0C7M7 580 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 ZNF91Q05481 1191 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 EFNB3Q15768 340 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 KLHL12Q53G59 568 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 ZNF454Q8N9F8 522 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 C1orf198Q9H425 327 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 AASSQ9UDR5 926 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 PSORS1C1Q9UIG5 152 aa9.15□□□□□ -0.94
NUP98-205ENST00000397007 GDF2Q9UK05 429 aaPredicted RBP9.15□□□□□ -0.94
NUP98-205ENST00000397007 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.15□□□□□ -0.95
NUP98-205ENST00000397007 CD8AP01732 235 aa9.15□□□□□ -0.95
NUP98-205ENST00000397007 HLA-HP01893 362 aa9.15□□□□□ -0.95
NUP98-205ENST00000397007 ZNF250P15622 560 aa9.15□□□□□ -0.95
NUP98-205ENST00000397007 KIR2DL3P43628 341 aa9.15□□□□□ -0.95
NUP98-205ENST00000397007 FOXD4Q12950 439 aaPredicted RBP9.15□□□□□ -0.95
NUP98-205ENST00000397007 ZNF672Q499Z4 452 aaPredicted RBP9.15□□□□□ -0.95
NUP98-205ENST00000397007 MBNL2Q5VZF2 373 aaKnown RBP9.15□□□□□ -0.95
NUP98-205ENST00000397007 KRTAP1-3Q8IUG1 177 aa9.15□□□□□ -0.95
NUP98-205ENST00000397007 ZNF511Q8NB15 262 aa9.15□□□□□ -0.95
NUP98-205ENST00000397007 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.95
NUP98-205ENST00000397007 NSMAFQ92636 917 aa9.15□□□□□ -0.95
NUP98-205ENST00000397007 FAM206AQ9NX38 181 aa9.15□□□□□ -0.95
NUP98-205ENST00000397007 CNOT2Q9NZN8 540 aaKnown RBP9.15□□□□□ -0.95
NUP98-205ENST00000397007 TIMM10BQ9Y5J6 103 aa9.15□□□□□ -0.95
NUP98-205ENST00000397007 UNC79Q9P2D8 2635 aa9.15□□□□□ -0.95
NUP98-205ENST00000397007 PCNX1Q96RV3 2341 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 A0A096LPE4 126 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 A0A1W2PPZ6 126 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 CCL1P22362 96 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 SLC35A2P78381 396 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 BSPH1Q075Z2 132 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 SNAPC1Q16533 368 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 C6orf52Q5T4I8 152 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 DEPDC4Q8N2C3 294 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 IL17RDQ8NFM7 739 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 TMEM171Q8WVE6 324 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 RHNO1Q9BSD3 238 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 POFUT1Q9H488 388 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 CENPEQ02224 2701 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 LRRK2Q5S007 2527 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 C5orf63A6NC05 138 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 PRSS44E7EML9 344 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 SMPD2O60906 423 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 TMCC2O75069 709 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 PTAFRP25105 342 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 HSPA13P48723 471 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 EVX1P49640 407 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 CDC42P60953 191 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 EGR3Q06889 387 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 POU4F2Q12837 409 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 SMN1Q16637 294 aaKnown RBP9.14□□□□□ -0.95
NUP98-205ENST00000397007 PABPC1L2AQ5JQF8 200 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 DHRSXQ8N5I4 330 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 OR52I1Q8NGK6 324 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 FAM81AQ8TBF8 368 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 GMPPBQ9Y5P6 360 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 YLPM1P49750 1951 aaKnown RBP9.14□□□□□ -0.95
NUP98-205ENST00000397007 PTPN13Q12923 2485 aa9.14□□□□□ -0.95
NUP98-205ENST00000397007 TUBAL3A6NHL2 446 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 C12orf71A8MTZ7 269 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 RER1O15258 196 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 LIMS3P0CW19 117 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 LIMS4P0CW20 117 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 RAB1AP62820 205 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 MVKQ03426 396 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 ACSM1Q08AH1 577 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms