RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PCDHB10Q9UN67 800 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 IGKV1D-43A0A0B4J1Z2 117 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 OR2AT4A6NND4 320 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 H2AFB1P0C5Y9 115 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 PNMTP11086 282 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 ACKR1Q16570 336 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 GLT8D1Q68CQ7 371 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 CATSPERDQ86XM0 798 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 ACBD4Q8NC06 268 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 PELOQ9BRX2 385 aaKnown RBP12.49□□□□□ -0.41
NUP98-204ENST00000397004 ABHD6Q9BV23 337 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 NKX6-2Q9C056 277 aaPredicted RBP12.49□□□□□ -0.41
NUP98-204ENST00000397004 PHF3Q92576 2039 aaKnown RBP12.49□□□□□ -0.41
NUP98-204ENST00000397004 FRYLO94915 3013 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 ABCD4O14678 606 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 ZNF264O43296 627 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 SLC16A7O60669 478 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 HLA-AP01891 365 aaKnown RBP12.49□□□□□ -0.41
NUP98-204ENST00000397004 HTR2CP28335 458 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 TAS2R19P59542 299 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 GMFBP60983 142 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 CTAG1AP78358 180 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 OR7A5Q15622 319 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 BPIFB2Q8N4F0 458 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 TMEM185AQ8NFB2 350 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 OR2I1PQ8NGU4 316 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 RRNAD1Q96FB5 475 aaKnown RBP12.49□□□□□ -0.41
NUP98-204ENST00000397004 TMEM131Q92545 1883 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 THADAQ6YHU6 1953 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 RNH1P13489 461 aaKnown RBP12.48□□□□□ -0.41
NUP98-204ENST00000397004 UNC119Q13432 240 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 PTCRAQ6ISU1 281 aaPredicted RBP12.48□□□□□ -0.41
NUP98-204ENST00000397004 CBLN2Q8IUK8 224 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 IGFLR1Q9H665 355 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 UBQLN4Q9NRR5 601 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 PURGQ9UJV8 347 aaKnown RBP12.48□□□□□ -0.41
NUP98-204ENST00000397004 RAB27BO00194 218 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 BCL2L11O43521 198 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 SPARCP09486 303 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 HNRNPA2B1P22626 353 aaKnown RBP12.48□□□□□ -0.41
NUP98-204ENST00000397004 DNTTIP1Q9H147 329 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 ESRP2Q9H6T0 727 aaKnown RBP12.48□□□□□ -0.41
NUP98-204ENST00000397004 PCDHB16Q9NRJ7 776 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 PLCL2Q9UPR0 1127 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 HLA-DQA2P01906 255 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 UBBP0CG47 229 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 UBCP0CG48 685 aaKnown RBP12.48□□□□□ -0.41
NUP98-204ENST00000397004 CASRP41180 1078 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 RPS27AP62979 156 aaKnown RBP12.48□□□□□ -0.41
NUP98-204ENST00000397004 UBA52P62987 128 aaKnown RBP12.48□□□□□ -0.41
NUP98-204ENST00000397004 ROM1Q03395 351 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 HFEQ30201 348 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 EMC4Q5J8M3 183 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 C19orf47Q8N9M1 422 aaKnown RBP12.48□□□□□ -0.41
NUP98-204ENST00000397004 MAP3K3Q99759 626 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 SAV1Q9H4B6 383 aaPredicted RBP12.48□□□□□ -0.41
NUP98-204ENST00000397004 G6PC2Q9NQR9 355 aa12.48□□□□□ -0.41
NUP98-204ENST00000397004 PRSS37A4D1T9 235 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 ADAM10O14672 748 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 ZNF432O94892 652 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 WDPCPO95876 746 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 SLC25A4P12235 298 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 GABRA4P48169 554 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 SLC25A36Q96CQ1 311 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 CMKLR1Q99788 373 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 MYOZ1Q9NP98 299 aaPredicted RBP12.47□□□□□ -0.41
NUP98-204ENST00000397004 SLC17A5Q9NRA2 495 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 PRR13Q9NZ81 148 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 H0YIG0 161 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 TNFRSF4P43489 277 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 FOXL2P58012 376 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 ZNF345Q14585 488 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.47□□□□□ -0.41
NUP98-204ENST00000397004 ASB12Q8WXK4 309 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 AQP3Q92482 292 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 SLC25A44Q96H78 314 aaPredicted RBP12.47□□□□□ -0.41
NUP98-204ENST00000397004 ZNF471Q9BX82 626 aaPredicted RBP12.47□□□□□ -0.41
NUP98-204ENST00000397004 EMC9Q9Y3B6 208 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 C17orf105B2RV13 164 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 ZNF736B4DX44 427 aaPredicted RBP12.47□□□□□ -0.41
NUP98-204ENST00000397004 H0YIZ8 118 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 TNFRSF10CO14798 259 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 ATG12O94817 140 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 CD34P28906 385 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 CENPAP49450 140 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 FMODQ06828 376 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 ZNF260Q3ZCT1 412 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 YAF2Q8IY57 180 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 NUDCD2Q8WVJ2 157 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 TSLPQ969D9 159 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 NKD1Q969G9 470 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 OR11A1Q9GZK7 315 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 HPF1Q9NWY4 346 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 PLEKHA6Q9Y2H5 1048 aa12.47□□□□□ -0.41
NUP98-204ENST00000397004 ZNF217O75362 1048 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 IL33O95760 270 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 PSMD4P55036 377 aaKnown RBP12.46□□□□□ -0.41
NUP98-204ENST00000397004 PRAMEF17Q5VTA0 474 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 SLC25A42Q86VD7 318 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms