RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 UBCP0CG48 685 aaKnown RBP13.31□□□□□ -0.28
CBX3-202ENST00000396386 KLK2P20151 261 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 EIF1AXP47813 144 aaKnown RBP13.31□□□□□ -0.28
CBX3-202ENST00000396386 PLA1AQ53H76 456 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 SLC25A47Q6Q0C1 308 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 KLHL24Q6TFL4 600 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 ESX1Q8N693 406 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 OR13C3Q8NGS6 347 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 ASB5Q8WWX0 329 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 PPP1R14AQ96A00 147 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 HAVCR1Q96D42 359 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 PIGQQ9BRB3 760 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 SPRY4Q9C004 299 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 C1orf198Q9H425 327 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 AUNIPQ9H7T9 357 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 PLEKHA1Q9HB21 404 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 FOXJ3Q9UPW0 622 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 SDK2Q58EX2 2172 aa13.31□□□□□ -0.28
CBX3-202ENST00000396386 ALPK2Q86TB3 2170 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 TMEM269A0A1B0GVZ9 245 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 SULT1B1O43704 296 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 TLX3O43711 291 aaPredicted RBP13.3□□□□□ -0.28
CBX3-202ENST00000396386 ZIC3O60481 467 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 EIF1BO60739 113 aaKnown RBP13.3□□□□□ -0.28
CBX3-202ENST00000396386 BTCP35070 178 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 MNDAP41218 407 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 SRP9P49458 86 aaKnown RBP13.3□□□□□ -0.28
CBX3-202ENST00000396386 CSNK2A1P68400 391 aaPredicted RBP13.3□□□□□ -0.28
CBX3-202ENST00000396386 MRPS10P82664 201 aaKnown RBP13.3□□□□□ -0.28
CBX3-202ENST00000396386 TMEM69Q5SWH9 247 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 B3GNTL1Q67FW5 361 aaPredicted RBP13.3□□□□□ -0.28
CBX3-202ENST00000396386 H3F3CQ6NXT2 135 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 LRFN4Q6PJG9 635 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 SIAH3Q8IW03 269 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 NAA11Q9BSU3 229 aaPredicted RBP13.3□□□□□ -0.28
CBX3-202ENST00000396386 DPAGT1Q9H3H5 408 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 SEC61A2Q9H9S3 476 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 P4HTMQ9NXG6 502 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 FOXJ2Q9P0K8 574 aa13.3□□□□□ -0.28
CBX3-202ENST00000396386 GJE1A6NN92 205 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 INMT-MINDY4F8WBC2 141 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 H0YC42 278 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 GABARAPH6UMI1 98 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 SRD5A2P31213 254 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 DCTDP32321 178 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 DNASE1L1P49184 302 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 MMP16P51512 607 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 AGFG1P52594 562 aaKnown RBP13.29□□□□□ -0.28
CBX3-202ENST00000396386 CLDN17P56750 224 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 BTG1P62324 171 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 H3F3AP84243 136 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 RAB11BQ15907 218 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 HIST3H3Q16695 136 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 STPG1Q5TH74 334 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 TMEM164Q5U3C3 297 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 TMEM244Q5VVB8 128 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 PRSS45Q7RTY3 260 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 SERPINA12Q8IW75 414 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 OR2AJ1Q8NGZ0 328 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 C15orf40Q8WUR7 153 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 ST6GAL2Q96JF0 529 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 CDC6Q99741 560 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 EDEM2Q9BV94 578 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 EMC7Q9NPA0 242 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 TAS2R4Q9NYW5 299 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 GDF2Q9UK05 429 aaPredicted RBP13.29□□□□□ -0.28
CBX3-202ENST00000396386 PHF3Q92576 2039 aaKnown RBP13.29□□□□□ -0.28
CBX3-202ENST00000396386 A0A0G2JMM0 328 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 A0A1W2PPB8 328 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 A0A1W2PRS3 328 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 KIR3DP1A8MWS1 328 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 ZNF878C9JN71 531 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 SLC17A2O00624 439 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 VAMP5O95183 116 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 CSRP1P21291 193 aaKnown RBP13.29□□□□□ -0.28
CBX3-202ENST00000396386 CDK2P24941 298 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 GDNFP39905 211 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 RAC1P63000 192 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 EIF3IQ13347 325 aaKnown RBP13.29□□□□□ -0.28
CBX3-202ENST00000396386 DYRK1AQ13627 763 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 KLF9Q13886 244 aaPredicted RBP13.29□□□□□ -0.28
CBX3-202ENST00000396386 TOMM20Q15388 145 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 ACER2Q5QJU3 275 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 ASPHD2Q6ICH7 369 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 CFAP77Q6ZQR2 320 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 FAM206AQ9NX38 181 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 NUFIP1Q9UHK0 495 aaKnown RBP13.29□□□□□ -0.28
CBX3-202ENST00000396386 CDV3Q9UKY7 258 aaKnown RBP13.29□□□□□ -0.28
CBX3-202ENST00000396386 LHFPL6Q9Y693 200 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 SPEGQ15772 3267 aa13.29□□□□□ -0.28
CBX3-202ENST00000396386 A8MV72 311 aaPredicted RBP13.28□□□□□ -0.28
CBX3-202ENST00000396386 KRT33AO76009 404 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 TPPPO94811 219 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 MT-CO3P00414 261 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 QDPRP09417 244 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 IGFBP3P17936 291 aaPredicted RBP13.28□□□□□ -0.28
CBX3-202ENST00000396386 PTH2RP49190 550 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 TAS2R20P59543 309 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 POU4F3Q15319 338 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 KCNMB1Q16558 191 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms