RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 C1orf198Q9H425 327 aa17.2■□□□□ 0.34
SNCA-203ENST00000394986 HINT3Q9NQE9 182 aaKnown RBP17.2■□□□□ 0.34
SNCA-203ENST00000394986 FAIMQ9NVQ4 179 aa17.2■□□□□ 0.34
SNCA-203ENST00000394986 PLCE1Q9P212 2302 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 AKAP9Q99996 3911 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 C5orf49A4QMS7 147 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 SGCEO43556 437 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 PTHP01270 115 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 HMGN1P05114 100 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 APOBEC3AP31941 199 aaPredicted RBP17.19■□□□□ 0.34
SNCA-203ENST00000394986 GALK2Q01415 458 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 ADIPOQQ15848 244 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 MSMPQ1L6U9 139 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 VASH1Q7L8A9 365 aaPredicted RBP17.19■□□□□ 0.34
SNCA-203ENST00000394986 CBR4Q8N4T8 237 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 ZNF511Q8NB15 262 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 BBS1Q8NFJ9 593 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 OR6K6Q8NGW6 343 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 PLEKHA8Q96JA3 519 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 POM121L2Q96KW2 1035 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 RIBC2Q9H4K1 309 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 WDR76Q9H967 626 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 PLEK2Q9NYT0 353 aa17.19■□□□□ 0.34
SNCA-203ENST00000394986 ZAR1LA6NP61 321 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 PRR23D1E9PI22 279 aaPredicted RBP17.18■□□□□ 0.34
SNCA-203ENST00000394986 OR4A8P0C604 315 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 PRR23D2P0DMB1 279 aaPredicted RBP17.18■□□□□ 0.34
SNCA-203ENST00000394986 GGT2P36268 569 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 WNT5AP41221 380 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 HTR5AP47898 357 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 GDI2P50395 445 aaKnown RBP17.18■□□□□ 0.34
SNCA-203ENST00000394986 SNAPC1Q16533 368 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 CCDC92Q53HC0 331 aaPredicted RBP17.18■□□□□ 0.34
SNCA-203ENST00000394986 LINC01590Q5TEZ4 76 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 AGAP6Q5VW22 663 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 C11orf71Q6IPW1 123 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 CPOQ8IVL8 374 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 ALDH16A1Q8IZ83 802 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 SLC7A6Q92536 515 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 PERPQ96FX8 193 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 OR51V1Q9H2C8 321 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 CBLN4Q9NTU7 201 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 BEX4Q9NWD9 120 aaPredicted RBP17.18■□□□□ 0.34
SNCA-203ENST00000394986 COMMD3-BMI1R4GMX3 469 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 MYO9AB2RTY4 2548 aa17.18■□□□□ 0.34
SNCA-203ENST00000394986 PRKYO43930 277 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 SMPD2O60906 423 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 SNAP29O95721 258 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 ALPLP05186 524 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 PAICSP22234 425 aaKnown RBP17.17■□□□□ 0.34
SNCA-203ENST00000394986 ERVS71-1P61550 626 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 ADAM8P78325 824 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 SLX4IPQ5VYV7 408 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 SLC18B1Q6NT16 456 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 CFAP77Q6ZQR2 320 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 OR1J2Q8NGS2 313 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 WACQ9BTA9 647 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 GABARAPL3Q9BY60 117 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 CXorf56Q9H5V9 222 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 USE1Q9NZ43 259 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 FZR1Q9UM11 496 aa17.17■□□□□ 0.34
SNCA-203ENST00000394986 OVOL3O00110 214 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 SYNGR3O43761 229 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 ZNF823P16415 610 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 FMO3P31513 532 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 SERPINF1P36955 418 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 MST1LQ2TV78 715 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 TMEM154Q6P9G4 183 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 CXXC5Q7LFL8 322 aaKnown RBP17.16■□□□□ 0.34
SNCA-203ENST00000394986 ZNF101Q8IZC7 436 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 SLC29A1Q99808 456 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 FOXC2Q99958 501 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 CDADC1Q9BWV3 514 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 CACNG6Q9BXT2 260 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 TEX12Q9BXU0 123 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 ZNF442Q9H7R0 627 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 CYB5R1Q9UHQ9 305 aa17.16■□□□□ 0.34
SNCA-203ENST00000394986 GDF2Q9UK05 429 aaPredicted RBP17.16■□□□□ 0.34
SNCA-203ENST00000394986 HEATR1Q9H583 2144 aaKnown RBP17.16■□□□□ 0.34
SNCA-203ENST00000394986 DSCAMO60469 2012 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 OR6C6A6NF89 314 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 DBHP09172 617 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 SPARCP09486 303 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 PTH2RP49190 550 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 ALDH3A2P51648 485 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 HIST1H3AP68431 136 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 RAB35Q15286 201 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 RCN1Q15293 331 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 ZIK1Q3SY52 487 aaPredicted RBP17.15■□□□□ 0.34
SNCA-203ENST00000394986 KLHL12Q53G59 568 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 HIST2H3PS2Q5TEC6 136 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 C12orf73Q69YU5 71 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 RFPL4BQ6ZWI9 263 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 HIST2H3AQ71DI3 136 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 BCDIN3DQ7Z5W3 292 aaKnown RBP17.15■□□□□ 0.34
SNCA-203ENST00000394986 GJC3Q8NFK1 279 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 ZMYND19Q96E35 227 aaPredicted RBP17.15■□□□□ 0.34
SNCA-203ENST00000394986 GRIP2Q9C0E4 1043 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 NDRG4Q9ULP0 352 aaKnown RBP17.15■□□□□ 0.34
SNCA-203ENST00000394986 SPEF1Q9Y4P9 236 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms