RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 RAB11BQ15907 218 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 PEAR1Q5VY43 1037 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 SEZ6L2Q6UXD5 910 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 SPERTQ8NA61 448 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 OR2M3Q8NG83 312 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 OR1J4Q8NGS1 313 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 RNF133Q8WVZ7 376 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 SLC25A28Q96A46 364 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 SPACA9Q96E40 222 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 RASL10BQ96S79 203 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 DEFB126Q9BYW3 111 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 PRMT8Q9NR22 394 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 MTFP1Q9UDX5 166 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 NXT1Q9UKK6 140 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 HHLA2Q9UM44 414 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 HSPB11Q9Y547 144 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 RALGAPA1Q6GYQ0 2036 aa13.7□□□□□ -0.22
UBE2D3-207ENST00000394801 A0A1B0GVI7 797 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 CIB4A0PJX0 185 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 RAD1O60671 282 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 ACHEP22303 614 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 DCTDP32321 178 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 MECP2P51608 486 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 EFNB2P52799 333 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 PHF19Q5T6S3 580 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 GLT8D1Q68CQ7 371 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 C9orf62Q8N4C0 152 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 MS4A3Q96HJ5 214 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 CKLFQ9UBR5 152 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 ZNF222Q9UK12 451 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 OR52A1Q9UKL2 312 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 CDV3Q9UKY7 258 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 EMC9Q9Y3B6 208 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 NPTNQ9Y639 398 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 A0A1B0GUH1 482 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 MEGF11A6BM72 1044 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 LEUTXA8MZ59 168 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 B8ZZF3 427 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 HPXP02790 462 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 MMP16P51512 607 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 P2RY4P51582 365 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 GPR85P60893 370 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 SNRPD2P62316 118 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 C3orf33Q6P1S2 294 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 ZNF782Q6ZMW2 699 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 ZNF704Q6ZNC4 412 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 IDO2Q6ZQW0 420 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 FADS6Q8N9I5 356 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 BEST4Q8NFU0 473 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 RBP7Q96R05 134 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 NKIRAS2Q9NYR9 191 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 KCNN3Q9UGI6 736 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 FLVCR2Q9UPI3 526 aa13.69□□□□□ -0.22
UBE2D3-207ENST00000394801 RBBP9O75884 186 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 ADH6P28332 368 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 BIDP55957 195 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 PCOLCEQ15113 449 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 ZNF239Q16600 458 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 THEM4Q5T1C6 240 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 TMEM244Q5VVB8 128 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 BIVMQ86UB2 503 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 SLC25A44Q96H78 314 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 NOX3Q9HBY0 568 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 TAS2R8Q9NYW2 309 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 KIF26BQ2KJY2 2108 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 TMEM269A0A1B0GVZ9 245 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 NTN3O00634 580 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 FKBP2P26885 142 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 SNTA1Q13424 505 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 INPP5JQ15735 1006 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 METTL11BQ5VVY1 283 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 LRFN4Q6PJG9 635 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 LINC00346Q8IVM7 164 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 WDSUB1Q8N9V3 476 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 PLPP7Q8NBV4 271 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 MAFAQ8NHW3 353 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 CYB5R1Q9UHQ9 305 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 FBXL2Q9UKC9 423 aa13.68□□□□□ -0.22
UBE2D3-207ENST00000394801 TMEM272A0A1B0GTI8 110 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 TEX51A0A1B0GUA7 166 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 NDUFB6O95139 128 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 ALDOBP05062 364 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 VEGFCP49767 419 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 TRA2AQ13595 282 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 LINC00303Q3SY05 128 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 TMEM81Q6P7N7 255 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 LYPD6Q86Y78 171 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 SLC38A6Q8IZM9 456 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 C11orf40Q8WZ69 217 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 EMC6Q9BV81 110 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 OR10A4Q9H209 315 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 NPDC1Q9NQX5 325 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 TAS2R4Q9NYW5 299 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 CHCHD2Q9Y6H1 151 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 LOC107986453A0A1B0GWG9 222 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 LOC390937A0A1W2PQ73 354 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 D6RAR5 112 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 CFIP05156 583 aa13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 UBCP0CG48 685 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-207ENST00000394801 ZNF28P17035 718 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms