RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CST2P09228 141 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 PNLIPP16233 465 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 ADRA2CP18825 462 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 NDUFV2P19404 249 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 TACR3P29371 465 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 MAS1LP35410 378 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 ST3GAL3Q11203 375 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 MAP2K5Q13163 448 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 GID4Q8IVV7 300 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 DND1Q8IYX4 353 aaKnown RBP11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 ZG16BQ96DA0 208 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 DPH1Q9BZG8 443 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 IL17CQ9P0M4 197 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 TAAR2Q9P1P5 351 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 CCNL1Q9UK58 526 aaPredicted RBP11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 RAB22AQ9UL26 194 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 PCDHB8Q9UN66 801 aa11.34□□□□□ -0.59
SLC28A1-203ENST00000394573 CCL25O15444 150 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 PRSS3P35030 304 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 LSSP48449 732 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 SULT1A2P50226 295 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 PTTG1IPP53801 180 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 MANFP55145 182 aaKnown RBP11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 RAB1AP62820 205 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 EIF5AP63241 154 aaKnown RBP11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 SOHLH1Q5JUK2 328 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 LEMD1Q68G75 181 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 SLC39A5Q6ZMH5 540 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 Q6ZVH6 145 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 NXPE1Q8N323 547 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 TOP6BLQ8N6T0 577 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 ADAD2Q8NCV1 583 aaKnown RBP11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 SHDQ96IW2 340 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 FAM83CQ9BQN1 747 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 VPS25Q9BRG1 176 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 R3HDMLQ9H3Y0 253 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 PARP11Q9NR21 331 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 TMED3Q9Y3Q3 217 aa11.33□□□□□ -0.59
SLC28A1-203ENST00000394573 UNC119BA6NIH7 251 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 SCGB1D1O95968 90 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 HOXC12P31275 282 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 RPL4P36578 427 aaKnown RBP11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 PNPLA4P41247 253 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 MC3RP41968 323 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 S100A10P60903 97 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 ACTA2P62736 377 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 ACTG2P63267 376 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 ACTC1P68032 377 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 ACTA1P68133 377 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 SIRPAP78324 504 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 RAB35Q15286 201 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF683Q8IZ20 524 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC41A3Q96GZ6 507 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC6A7Q99884 636 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC17A9Q9BYT1 436 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 ACTR3CQ9C0K3 210 aaPredicted RBP11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 COL16A1Q07092 1604 aaPredicted RBP11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 FCMRO60667 390 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 LEFTY1O75610 366 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 NID1P14543 1247 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 IFNGR2P38484 337 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 CCSMST1Q4G0I0 132 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 XKR4Q5GH76 650 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 LEG1Q6P5S2 330 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 LYG2Q86SG7 212 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 NUDT10Q8NFP7 164 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 OR13C3Q8NGS6 347 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 EDAQ92838 391 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 TAAR8Q969N4 342 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 RCC1LQ96I51 464 aaKnown RBP11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 PHB2Q99623 299 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 SCRT1Q9BWW7 348 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 POTEKPQ9BYX7 375 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 A4GALTQ9NPC4 353 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 MARCH5Q9NX47 278 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 TAS2R8Q9NYW2 309 aa11.33□□□□□ -0.6
SLC28A1-203ENST00000394573 FAM171A2A8MVW0 826 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 TMEM238C9JI98 176 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 PLRG1O43660 514 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 RPP14O95059 124 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 ZBTB25P24278 435 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 SP3Q02447 781 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 SRSF4Q08170 494 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 DCAF4L1Q3SXM0 396 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 GRHL2Q6ISB3 625 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 TMEM205Q6UW68 189 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 GALNTL5Q7Z4T8 443 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 MRIQ9BWK5 157 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC35B3Q9H1N7 401 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 OR52D1Q9H346 318 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 GSKIPQ9P0R6 139 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 C20orf202A1L168 122 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 H3BQ15 152 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 MTX2O75431 263 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 EPHA1P21709 976 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 WNT5AP41221 380 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 CRMP1Q14194 572 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF627Q7L945 461 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 CMTM1Q8IZ96 169 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 SUMF2Q8NBJ7 301 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms