RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 GON4LQ3T8J9 2241 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 A0A0A6YYH2 397 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 DCDC2BA2VCK2 349 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 MEGF11A6BM72 1044 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 A6NJ64 397 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 TRIM77I1YAP6 450 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 CD74P04233 296 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 GLO1Q04760 184 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 ATPAF1Q5TC12 328 aaPredicted RBP16.9■□□□□ 0.3
CBX1-202ENST00000393408 Q6ZS52 159 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 OR13C3Q8NGS6 347 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 GPR119Q8TDV5 335 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 CMKLR1Q99788 373 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 EDEM2Q9BV94 578 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 OR11A1Q9GZK7 315 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 DHCR7Q9UBM7 475 aaKnown RBP16.9■□□□□ 0.3
CBX1-202ENST00000393408 ZNF107Q9UII5 783 aaPredicted RBP16.9■□□□□ 0.3
CBX1-202ENST00000393408 EMC9Q9Y3B6 208 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 TEX46H3BTG2 121 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 SPDEFO95238 335 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 RLN2P04090 185 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 ABCD3P28288 659 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 CRABP1P29762 137 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 BTN1A1Q13410 526 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 MOGAT2Q3SYC2 334 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 GKN2Q86XP6 184 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 EIF4E3Q8N5X7 224 aaKnown RBP16.89■□□□□ 0.29
CBX1-202ENST00000393408 ZBTB44Q8NCP5 570 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 STEAP2Q8NFT2 490 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 OR1J2Q8NGS2 313 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 RELTQ969Z4 430 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 SPTBN5Q9NRC6 3674 aaKnown RBP16.89■□□□□ 0.29
CBX1-202ENST00000393408 ZNF230Q9UIE0 474 aaPredicted RBP16.89■□□□□ 0.29
CBX1-202ENST00000393408 MSRAQ9UJ68 235 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 RP1P56715 2156 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 A0A1B0GTI1 187 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 ZNF736B4DX44 427 aaPredicted RBP16.89■□□□□ 0.29
CBX1-202ENST00000393408 CYB5AP00167 134 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 CD8AP01732 235 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 NME1P15531 152 aaKnown RBP16.89■□□□□ 0.29
CBX1-202ENST00000393408 DNASE1L1P49184 302 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 LBX1P52954 281 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 PNLIPRP2P54317 469 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 SPOCK1Q08629 439 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 C1orf100Q5SVJ3 147 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 GRINAQ7Z429 371 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 FAM174AQ8TBP5 190 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 ST8SIA4Q92187 359 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 ZMAT3Q9HA38 289 aaKnown RBP16.89■□□□□ 0.29
CBX1-202ENST00000393408 G6PC2Q9NQR9 355 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 FBXL2Q9UKC9 423 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 KLK13Q9UKR3 277 aa16.89■□□□□ 0.29
CBX1-202ENST00000393408 LOC107986453A0A1B0GWG9 222 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 LOC390937A0A1W2PQ73 354 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 TSPAN4O14817 238 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 FADS1O60427 444 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 AHSA1O95433 338 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 HPP00738 406 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 ISG15P05161 165 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 ACHEP22303 614 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 ARRB1P49407 418 aaPredicted RBP16.88■□□□□ 0.29
CBX1-202ENST00000393408 SLC26A5P58743 744 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 CLVS2Q5SYC1 327 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 OR10K2Q6IF99 312 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 C17orf82Q86X59 251 aaPredicted RBP16.88■□□□□ 0.29
CBX1-202ENST00000393408 LYPD6Q86Y78 171 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 JAGN1Q8N5M9 183 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 MYEF2Q9P2K5 600 aaKnown RBP16.88■□□□□ 0.29
CBX1-202ENST00000393408 HLA-DOBP13765 273 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 ATF4P18848 351 aaPredicted RBP16.88■□□□□ 0.29
CBX1-202ENST00000393408 SRSF4Q08170 494 aaKnown RBP16.88■□□□□ 0.29
CBX1-202ENST00000393408 PRAMEF17Q5VTA0 474 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 ZNF546Q86UE3 836 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 BEST3Q8N1M1 668 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 BPIFB2Q8N4F0 458 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 SLC26A10Q8NG04 563 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 OR5M8Q8NGP6 311 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 OR13C8Q8NGS7 320 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 RLN3Q8WXF3 142 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 DAZLQ92904 295 aaKnown RBP16.88■□□□□ 0.29
CBX1-202ENST00000393408 MVB12AQ96EY5 273 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 MS4A7Q9GZW8 240 aaPredicted RBP16.88■□□□□ 0.29
CBX1-202ENST00000393408 GPR160Q9UJ42 338 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 OR52A1Q9UKL2 312 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 RHBDD3Q9Y3P4 386 aa16.88■□□□□ 0.29
CBX1-202ENST00000393408 D6RAR5 112 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 LMX1BO60663 402 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 SDC3O75056 442 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 MGMTP16455 207 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 ZNF28P17035 718 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 AGTR1P30556 359 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 DHRS2Q13268 280 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 VWA2Q5GFL6 755 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 TFAP2EQ6VUC0 442 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 PTX4Q96A99 478 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 SLC6A7Q99884 636 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 FBXO4Q9UKT5 387 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 FTCDNL1E5RQL4 147 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 UBBP0CG47 229 aa16.87■□□□□ 0.29
CBX1-202ENST00000393408 UBCP0CG48 685 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms