RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 LAP3P28838 519 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 EGR3Q06889 387 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 EIF2B1Q14232 305 aaKnown RBP11.96□□□□□ -0.49
PTN-202ENST00000393083 CDSNQ15517 529 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 ZNF684Q5T5D7 378 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 SLC18B1Q6NT16 456 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 GDPGP1Q6ZNW5 385 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 ZNF808Q8N4W9 903 aaPredicted RBP11.96□□□□□ -0.49
PTN-202ENST00000393083 NAXEQ8NCW5 288 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 RNF128Q8TEB7 428 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 TRMT61AQ96FX7 289 aaKnown RBP11.96□□□□□ -0.49
PTN-202ENST00000393083 AMELYQ99218 206 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 TM9SF2Q99805 663 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 TMED9Q9BVK6 235 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 CXorf56Q9H5V9 222 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 KLHL9Q9P2J3 617 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 MRM2Q9UI43 246 aaKnown RBP11.96□□□□□ -0.49
PTN-202ENST00000393083 ST6GALNAC2Q9UJ37 374 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 CACNA1CQ13936 2221 aa11.96□□□□□ -0.49
PTN-202ENST00000393083 METTL15A6NJ78 407 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 SLC43A1O75387 559 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 HRGP04196 525 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 EDNRAP25101 427 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 UGT2B10P36537 528 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 PSMB10P40306 273 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 SERPINB10P48595 397 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 SLC3A1Q07837 685 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 LSAMPQ13449 338 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 GPR50Q13585 617 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 CDK5R1Q15078 307 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 PHYHD1Q5SRE7 291 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 XKRXQ6PP77 449 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 CHMP1BQ7LBR1 199 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 AAED1Q7RTV5 226 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 YIPF7Q8N8F6 280 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 ZNF454Q8N9F8 522 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 DYNC2LI1Q8TCX1 351 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 ASB17Q8WXJ9 295 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 C11orf40Q8WZ69 217 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 ZNF775Q96BV0 537 aaPredicted RBP11.96□□□□□ -0.5
PTN-202ENST00000393083 PSMG3-AS1Q96PY0 264 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 PRRG4Q9BZD6 226 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 SEC61A2Q9H9S3 476 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 ZNF175Q9Y473 711 aa11.96□□□□□ -0.5
PTN-202ENST00000393083 SLC22A20A6NK97 555 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 PLPP2O43688 288 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 AQP8O94778 261 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 ABHD16AO95870 558 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 TACSTD2P09758 323 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 ZNF133P52736 654 aaPredicted RBP11.95□□□□□ -0.5
PTN-202ENST00000393083 FABP5Q01469 135 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 TEX30Q5JUR7 227 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 C10orf128Q5T292 105 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 DMKNQ6E0U4 476 aaPredicted RBP11.95□□□□□ -0.5
PTN-202ENST00000393083 LRFN4Q6PJG9 635 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 KCTD20Q7Z5Y7 419 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 LINC00346Q8IVM7 164 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 C20orf196Q8IYI0 205 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 OR52N5Q8NH56 324 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 FNDC9Q8TBE3 224 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 INTS12Q96CB8 462 aaKnown RBP11.95□□□□□ -0.5
PTN-202ENST00000393083 OR8B4Q96RC9 309 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 ABHD6Q9BV23 337 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 ULBP2Q9BZM5 246 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 TXNL4BQ9NX01 149 aaKnown RBP11.95□□□□□ -0.5
PTN-202ENST00000393083 SLCO1C1Q9NYB5 712 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 FOXD3Q9UJU5 478 aaPredicted RBP11.95□□□□□ -0.5
PTN-202ENST00000393083 POLR1DQ9Y2S0 133 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 BAHCC1Q9P281 2608 aa11.95□□□□□ -0.5
PTN-202ENST00000393083 IGKV3D-15A0A087WSY6 115 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 TRDV1A0A1B0GX56 115 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 HSPB2A8KAH6 182 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 GABRPO00591 440 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 OGG1O15527 345 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 SULT1C4O75897 302 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 RGS9O75916 674 aaPredicted RBP11.94□□□□□ -0.5
PTN-202ENST00000393083 RPP14O95059 124 aaKnown RBP11.94□□□□□ -0.5
PTN-202ENST00000393083 IL2RAP01589 272 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 HLA-DPB1P04440 258 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 CD53P19397 219 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 CHRNB4P30926 498 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 CDAP32320 146 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 GDI2P50395 445 aaKnown RBP11.94□□□□□ -0.5
PTN-202ENST00000393083 SIRPAP78324 504 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 MRPL28Q13084 256 aaKnown RBP11.94□□□□□ -0.5
PTN-202ENST00000393083 HSPB2Q16082 182 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 PCK2Q16822 640 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 C22orf42Q6IC83 251 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 RPL22L1Q6P5R6 122 aaKnown RBP11.94□□□□□ -0.5
PTN-202ENST00000393083 KCTD18Q6PI47 426 aaPredicted RBP11.94□□□□□ -0.5
PTN-202ENST00000393083 CD200R1LQ6Q8B3 271 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 LRRN1Q6UXK5 716 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 SPATC1Q76KD6 591 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 LIX1LQ8IVB5 337 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 LILRB4Q8NHJ6 448 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 HAVCR2Q8TDQ0 301 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 ASB5Q8WWX0 329 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 TMEM45BQ96B21 275 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 SMIM19Q96E16 107 aa11.94□□□□□ -0.5
PTN-202ENST00000393083 PGLYRP3Q96LB9 341 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms