RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 C4orf47A7E2U8 309 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 RHEBQ15382 184 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.01□□□□□ -0.01
SCN3B-202ENST00000392770 MMP25Q9NPA2 562 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 SLC34A2O95436 690 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 GUSBP08236 651 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 LTC4SQ16873 150 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 FBXW12Q6X9E4 464 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 OR11L1Q8NGX0 322 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 C17orf50Q8WW18 174 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 FBXO8Q9NRD0 319 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 SLC22A13Q9Y226 551 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 PCDHGA5Q9Y5G8 931 aa15.01□□□□□ -0.01
SCN3B-202ENST00000392770 MYO7AQ13402 2215 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 A0A096LPE4 126 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 A0A1W2PPZ6 126 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 HSPB2A8KAH6 182 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 STMND1H3BQB6 276 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 EIF4EP06730 217 aaKnown RBP15□□□□□ -0.01
SCN3B-202ENST00000392770 HSPB2Q16082 182 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 DTWD2Q8NBA8 298 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 MT-CO3P00414 261 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF133P52736 654 aaPredicted RBP15□□□□□ -0.01
SCN3B-202ENST00000392770 RPS18P62269 152 aaKnown RBP15□□□□□ -0.01
SCN3B-202ENST00000392770 FAPQ12884 760 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 NXPH2O95156 264 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 IFNA1P01562 189 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 BATF2Q8N1L9 274 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 TSNAXQ99598 290 aaKnown RBP15□□□□□ -0.01
SCN3B-202ENST00000392770 DOCK3Q8IZD9 2030 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 AKR1C8PQ5T2L2 129 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 HEPHL1Q6MZM0 1159 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 HAGHLQ6PII5 290 aaPredicted RBP15□□□□□ -0.01
SCN3B-202ENST00000392770 WDR74Q6RFH5 385 aaPredicted RBP15□□□□□ -0.01
SCN3B-202ENST00000392770 DHRS13Q6UX07 377 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 OR5AS1Q8N127 324 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 RNF128Q8TEB7 428 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 SLCO5A1Q9H2Y9 848 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 LANCL2Q9NS86 450 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 DUSP13Q9UII6 198 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 A0A0B4J203 849 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 CDAP32320 146 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF141Q15928 474 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 GPR155Q7Z3F1 870 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 KIF18BQ86Y91 864 aa15□□□□□ -0.01
SCN3B-202ENST00000392770 E9PI62 339 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 M0R135 149 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 M0R296 226 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 AIPO00170 330 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 PLGLAQ15195 96 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 ELP2Q6IA86 826 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 OR2V1Q8NHB1 315 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF799Q96GE5 643 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 ZCCHC4Q9H5U6 513 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 CCDC86Q9H6F5 360 aaKnown RBP14.99□□□□□ -0.01
SCN3B-202ENST00000392770 GPR84Q9NQS5 396 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 FBXL4Q9UKA2 621 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 TOX3O15405 576 aaPredicted RBP14.99□□□□□ -0.01
SCN3B-202ENST00000392770 MFGE8Q08431 387 aaPredicted RBP14.99□□□□□ -0.01
SCN3B-202ENST00000392770 LINC00299Q6ZSB3 139 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 SMIM3Q9BZL3 60 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 GDF2Q9UK05 429 aaPredicted RBP14.99□□□□□ -0.01
SCN3B-202ENST00000392770 A0A0G2JMZ2 1700 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 TRIM64CA6NLI5 447 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 NPIPB8E9PQR5 432 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 SSX5O60225 188 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 RRAS2P62070 204 aaPredicted RBP14.99□□□□□ -0.01
SCN3B-202ENST00000392770 OR1C1Q15619 314 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 TMEM81Q6P7N7 255 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 FJX1Q86VR8 437 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 ZNF681Q96N22 645 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 SNX18Q96RF0 628 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 C1QTNF6Q9BXI9 259 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 OCIAD1Q9NX40 245 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 PCDHB10Q9UN67 800 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 HMGA2P52926 109 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 STAC2Q6ZMT1 411 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 Q6ZNX1 250 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.99□□□□□ -0.01
SCN3B-202ENST00000392770 ARR3P36575 388 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 MYBPHQ13203 477 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 POFUT1Q9H488 388 aa14.99□□□□□ -0.01
SCN3B-202ENST00000392770 C5orf49A4QMS7 147 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 GRPP07492 148 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 CCR9P51686 369 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 GPR157Q5UAW9 335 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 C16orf47Q6ZP98 133 aaPredicted RBP14.98□□□□□ -0.01
SCN3B-202ENST00000392770 REEP6Q96HR9 211 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 SIGLEC11Q96RL6 698 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 ATF6BQ99941 703 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 B3GAT1Q9P2W7 334 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 ACTL6BO94805 426 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 LPLP06858 475 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 RAP2BP61225 183 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 TPBGQ13641 420 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 BEX5Q5H9J7 111 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 EMG1Q92979 244 aaKnown RBP14.98□□□□□ -0.01
SCN3B-202ENST00000392770 NKX3-1Q99801 234 aaPredicted RBP14.98□□□□□ -0.01
SCN3B-202ENST00000392770 MED18Q9BUE0 208 aa14.98□□□□□ -0.01
SCN3B-202ENST00000392770 PBDC1Q9BVG4 233 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms