RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 LIPNQ5VXI9 398 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 OR10K1Q8NGX5 313 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 OR6N1Q8NGY5 312 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 OR10AC1Q8NH08 325 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 OR8S1Q8NH09 359 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 OR5AK2Q8NH90 309 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 DUSP19Q8WTR2 217 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 MRPL48Q96GC5 212 aaKnown RBP16.5■□□□□ 0.23
TRAF3-203ENST00000392745 TRAV14DV4A0A0A6YYC5 116 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 UPK3AO75631 287 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 ANXA2P07355 339 aaKnown RBP16.5■□□□□ 0.23
TRAF3-203ENST00000392745 GTF2F2P13984 249 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 RAB3AP20336 220 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 CCR4P51679 360 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 CTAG1AP78358 180 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 ODF4Q2M2E3 257 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 C16orf47Q6ZP98 133 aaPredicted RBP16.5■□□□□ 0.23
TRAF3-203ENST00000392745 BIVMQ86UB2 503 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 ZNF440Q8IYI8 595 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 APCDD1LQ8NCL9 501 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 ALG12Q9BV10 488 aa16.5■□□□□ 0.23
TRAF3-203ENST00000392745 MRM2Q9UI43 246 aaKnown RBP16.5■□□□□ 0.23
TRAF3-203ENST00000392745 ZNF230Q9UIE0 474 aaPredicted RBP16.5■□□□□ 0.23
TRAF3-203ENST00000392745 SP9P0CG40 484 aa16.49■□□□□ 0.23
TRAF3-203ENST00000392745 CSRP1P21291 193 aaKnown RBP16.49■□□□□ 0.23
TRAF3-203ENST00000392745 IL12BP29460 328 aa16.49■□□□□ 0.23
TRAF3-203ENST00000392745 ALKBH1Q13686 389 aaKnown RBP16.49■□□□□ 0.23
TRAF3-203ENST00000392745 SLC35D3Q5M8T2 416 aa16.49■□□□□ 0.23
TRAF3-203ENST00000392745 LEG1Q6P5S2 330 aa16.49■□□□□ 0.23
TRAF3-203ENST00000392745 DPY19L2P2Q6ZN68 376 aa16.49■□□□□ 0.23
TRAF3-203ENST00000392745 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-203ENST00000392745 SLC43A2Q8N370 569 aa16.49■□□□□ 0.23
TRAF3-203ENST00000392745 NFAM1Q8NET5 270 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-203ENST00000392745 OR51A4Q8NGJ6 313 aa16.49■□□□□ 0.23
TRAF3-203ENST00000392745 C15orf40Q8WUR7 153 aa16.49■□□□□ 0.23
TRAF3-203ENST00000392745 SLC25A28Q96A46 364 aa16.49■□□□□ 0.23
TRAF3-203ENST00000392745 SLC6A15Q9H2J7 730 aa16.49■□□□□ 0.23
TRAF3-203ENST00000392745 SAV1Q9H4B6 383 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-203ENST00000392745 RXFP3Q9NSD7 469 aa16.49■□□□□ 0.23
TRAF3-203ENST00000392745 VSTM2BA6NLU5 285 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 ALOX12BO75342 701 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 GLCEO94923 617 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 CD3DP04234 171 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 CDKN2AP42771 156 aaKnown RBP16.48■□□□□ 0.23
TRAF3-203ENST00000392745 PLCXD2Q0VAA5 305 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 ELP2Q6IA86 826 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 MARCH3Q86UD3 253 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 OR51D1Q8NGF3 324 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 OIT3Q8WWZ8 545 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 WDR13Q9H1Z4 485 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 SLC25A32Q9H2D1 315 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 EXO5Q9H790 373 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 IGKV1D-42A0A075B6H8 117 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 GGT3PA6NGU5 568 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 RFPL4AA6NLU0 287 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 OR6C76A6NM76 312 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 RFPL4AL1F8VTS6 287 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 GMFGO60234 142 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 TMEM127O75204 238 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 ONECUT2O95948 504 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 CSF1P09603 554 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 MAPK3P27361 379 aaPredicted RBP16.48■□□□□ 0.23
TRAF3-203ENST00000392745 RNF4P78317 190 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 HYAL4Q2M3T9 481 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 SHEQ5VZ18 495 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 WBP2NLQ6ICG8 309 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 LRRN1Q6UXK5 716 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 NKX3-1Q99801 234 aaPredicted RBP16.48■□□□□ 0.23
TRAF3-203ENST00000392745 BARX1Q9HBU1 254 aaPredicted RBP16.48■□□□□ 0.23
TRAF3-203ENST00000392745 HPF1Q9NWY4 346 aa16.48■□□□□ 0.23
TRAF3-203ENST00000392745 SMAD9O15198 467 aaKnown RBP16.47■□□□□ 0.23
TRAF3-203ENST00000392745 CTAG2O75638 210 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 ZNF28P17035 718 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 DUSP3P51452 185 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-203ENST00000392745 ZNF117Q03924 483 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 MPPED2Q15777 294 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 LY6G6FQ5SQ64 297 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 FAM69BQ5VUD6 431 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 BPIFCQ8NFQ6 507 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 ADAD1Q96M93 576 aaKnown RBP16.47■□□□□ 0.23
TRAF3-203ENST00000392745 SPSB2Q99619 263 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 ULBP3Q9BZM4 244 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 TAS2R3Q9NYW6 316 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 CACNA1CQ13936 2221 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 TRAV18A0A075B6X5 111 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 TRBV5-5A0A0J9YX44 114 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 ZNF354AO60765 605 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-203ENST00000392745 AKAIN1P0CW23 69 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 FGF5P12034 268 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 EMP2P54851 167 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 MC2RQ01718 297 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 ZFP36L1Q07352 338 aaKnown RBP16.47■□□□□ 0.23
TRAF3-203ENST00000392745 STK11Q15831 433 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 SLC6A19Q695T7 634 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 FAM220AQ7Z4H9 259 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 KRT77Q7Z794 578 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 ATG4DQ86TL0 474 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-203ENST00000392745 ZNF546Q86UE3 836 aa16.47■□□□□ 0.23
TRAF3-203ENST00000392745 WDR77Q9BQA1 342 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-203ENST00000392745 ARRDC1-AS1Q9H2J1 176 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms