RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TMEM246Q9BRR3 403 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 HINT2Q9BX68 163 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 PRRG3Q9BZD7 231 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 NDEL1Q9GZM8 345 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 ROGDIQ9GZN7 287 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 NAT10Q9H0A0 1025 aaKnown RBP1.51□□□□□ -2.17
TRAV40-201ENST00000390467 C20orf85Q9H1P6 137 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 OR2AG1Q9H205 316 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 OR51V1Q9H2C8 321 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 GOLPH3Q9H4A6 298 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 SAV1Q9H4B6 383 aaPredicted RBP1.51□□□□□ -2.17
TRAV40-201ENST00000390467 DHX33Q9H6R0 707 aaKnown RBP1.51□□□□□ -2.17
TRAV40-201ENST00000390467 METTL8Q9H825 291 aaKnown RBP1.51□□□□□ -2.17
TRAV40-201ENST00000390467 C12orf10Q9HB07 376 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 WFDC1Q9HC57 220 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 LYRM4Q9HD34 91 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 MRPL40Q9NQ50 206 aaKnown RBP1.51□□□□□ -2.17
TRAV40-201ENST00000390467 ZNF302Q9NR11 478 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 TREX1Q9NSU2 369 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 NAGKQ9UJ70 344 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 ADAM28Q9UKQ2 775 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 VANGL2Q9ULK5 521 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 SCML1Q9UN30 329 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 RASD1Q9Y272 281 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 PIGLQ9Y2B2 252 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 POFUT2Q9Y2G5 429 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 V9GY05 133 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 SMARCA2P51531 1590 aa1.51□□□□□ -2.17
TRAV40-201ENST00000390467 ROCK1Q13464 1354 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 DHX57Q6P158 1386 aaKnown RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 IGSF9BQ9UPX0 1349 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 METTL21EPA6NDL7 271 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 MGAT4DA6NG13 374 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 ARGFXA6NJG6 315 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 PCP4L1A6NKN8 68 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 SNTNA6NMZ2 147 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 A8MXQ7 604 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 C9JVG2 144 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 PGRMC1O00264 195 aaKnown RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 SDHDO14521 159 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CD5LO43866 347 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 B3GAT3O94766 335 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 OR2F2O95006 317 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 BRI3O95415 125 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 C6orf47O95873 294 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CA1P00915 261 aaPredicted RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 IFNA14P01570 189 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 FTH1P02794 183 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 HMGN1P05114 100 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 IGKV4-1P06312 121 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 SNRPAP09012 282 aaKnown RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CD3GP09693 182 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CTXN2P0C2S0 81 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 HSMCR30P0CW71 290 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 DBTP11182 482 aaKnown RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TDGF1P13385 188 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TPSB2P20231 275 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CXCR2P25025 360 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 GNA11P29992 359 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 OTX1P32242 354 aaPredicted RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 GTF2H1P32780 548 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 P2RY2P41231 377 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TPMTP51580 245 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TDGF1P3P51864 188 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 KPNA2P52292 529 aaKnown RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CDH4P55283 916 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 ATP5J2P56134 94 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 RGS8P57771 180 aaPredicted RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TNNC1P63316 161 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 GLO1Q04760 184 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 FGL1Q08830 312 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 SMARCB1Q12824 385 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TSPAN31Q12999 210 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 ITIH4Q14624 930 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TRIP10Q15642 601 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TPSAB1Q15661 275 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TATDN3Q17R31 274 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 MARCH8Q5T0T0 291 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 C6orf183Q5T699 404 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 RNASEKQ6P5S7 137 aaKnown RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TTC33Q6PID6 262 aaPredicted RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 ASCL4Q6XD76 172 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 RTL4Q6ZR62 310 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 UTS2BQ765I0 119 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 LHFPL4Q7Z7J7 247 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 SLC26A11Q86WA9 606 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 TMEM17Q86X19 198 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 PCP2Q8IVA1 136 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CCDC50Q8IVM0 306 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 VSTM4Q8IW00 320 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 MICU2Q8IYU8 434 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 ZNF683Q8IZ20 524 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CYB561A3Q8NBI2 242 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 FAM83FQ8NEG4 500 aaPredicted RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 OR5L2Q8NGL0 311 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 PNPT1Q8TCS8 783 aaKnown RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 ST8SIA1Q92185 356 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 RPL3LQ92901 407 aaKnown RBP1.5□□□□□ -2.17
TRAV40-201ENST00000390467 CERS2Q96G23 380 aa1.5□□□□□ -2.17
TRAV40-201ENST00000390467 HPDLQ96IR7 371 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms