RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 FGGP02679 453 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 CRYBA1P05813 215 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 CRHP06850 196 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 H2AFZP0C0S5 128 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 BCKDHAP12694 445 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 EZRP15311 586 aaKnown RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 CAPN3P20807 821 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 PTBP1P26599 531 aaKnown RBP eCLIP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 ADD2P35612 726 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 RGS7P49802 495 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 PPP5CP53041 499 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 PRRX1P54821 245 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 TFAMQ00059 246 aaKnown RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 CUL1Q13616 776 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM183BQ1AE95 376 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 MAJINQ3KP22 176 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 GPAT3Q53EU6 434 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 CEP55Q53EZ4 464 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 CPTPQ5TA50 214 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 METTL11BQ5VVY1 283 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 KDM4DQ6B0I6 523 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 SNRNP48Q6IEG0 339 aaKnown RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 TCEAL6Q6IPX3 200 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 PYHIN1Q6K0P9 492 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 PLBD1Q6P4A8 553 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 UGT2A3Q6UWM9 527 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 CASP12Q6UXS9 341 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 CERS6Q6ZMG9 384 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 ENOSF1Q7L5Y1 443 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 HSD11B1LQ7Z5J1 315 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 SNX20Q7Z614 316 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM183AQ8IXX5 376 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM123Q8N131 208 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM252Q8N6L7 170 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 SMYD1Q8NB12 490 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 BBOF1Q8ND07 529 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 APPL2Q8NEU8 664 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 SPATA4Q8NEY3 305 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR4A4PQ8NGN8 299 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 KIF18AQ8NI77 898 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 DEPDC1BQ8WUY9 529 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 KIFAP3Q92845 792 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 LEAP2Q969E1 77 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 ISG20Q96AZ6 181 aaKnown RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 DCPSQ96C86 337 aaKnown RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 MS4A10Q96PG2 267 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 ARHGDIGQ99819 225 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 B9D2Q9BPU9 175 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 TBCDQ9BTW9 1192 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 CCDC106Q9BWC9 280 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 ACAT2Q9BWD1 397 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 APOL6Q9BWW8 343 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 TSSK6Q9BXA6 273 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 ROPN1BQ9BZX4 212 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 MED28Q9H204 178 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 ALDH8A1Q9H2A2 487 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 PPA2Q9H2U2 334 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 MIXL1Q9H2W2 232 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 RNF167Q9H6Y7 350 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM100Q9NV29 134 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 DNAJC11Q9NVH1 559 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 MRPL22Q9NWU5 206 aaKnown RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 PPP1R14DQ9NXH3 145 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 VAPAQ9P0L0 249 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 EIF3KQ9UBQ5 218 aaKnown RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 SLC23A2Q9UGH3 650 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 TRMT6Q9UJA5 497 aaKnown RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 APPL1Q9UKG1 709 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 NUP50Q9UKX7 468 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM14AQ9Y6G1 99 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 MYH9P35579 1960 aaKnown RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 SSH2Q76I76 1423 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 E9PCH4 1651 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNF831Q5JPB2 1677 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 CAMTA1Q9Y6Y1 1673 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 ATAD2BQ9ULI0 1458 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 TJP1Q07157 1748 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 ANKRD30BQ9BXX2 1392 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 NEMP2A6NFY4 417 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 FAM47DPA6NHR8 397 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 CASTOR2A6NHX0 329 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM212A6NML5 194 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 DHRS7CA6NNS2 312 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 H7C0S8 307 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 CCL22O00626 93 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 CFLARO15519 480 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 AQP9O43315 295 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 DDX58O95786 925 aaKnown RBP-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 SERPINA3P01011 423 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR8U8P0C7N1 319 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 SPART-AS1P0CW21 52 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 LAMP2P13473 410 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 ACYP2P14621 99 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 EVI2BP34910 448 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNF93P35789 620 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 PPM1AP35813 382 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 MAGEA2P43356 314 aa-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 ARRB1P49407 418 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 RPL14P50914 215 aaKnown RBP-1.68□□□□□ -2.68
RNU6-540P-201ENST00000384622 SGSHP51688 502 aa-1.68□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms