RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TEX12Q9BXU0 123 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 MRPL22Q9NWU5 206 aaKnown RBP14□□□□□ -0.17
SNRPB-201ENST00000381342 ORC6Q9Y5N6 252 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 LHFPL6Q9Y693 200 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 DSCAMO60469 2012 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 IQCMA0A1B0GVH7 501 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 E7EQL1 145 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 DOK2O60496 412 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 PSKH1P11801 424 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 PLP2Q04941 152 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 TRIP10Q15642 601 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 SNAPC1Q16533 368 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 ZIK1Q3SY52 487 aaPredicted RBP13.99□□□□□ -0.17
SNRPB-201ENST00000381342 CORO6Q6QEF8 472 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 CPOQ8IVL8 374 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 LINC00346Q8IVM7 164 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 PAQR4Q8N4S7 273 aaPredicted RBP13.99□□□□□ -0.17
SNRPB-201ENST00000381342 PRRG3Q9BZD7 231 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 OR51V1Q9H2C8 321 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 CISD1Q9NZ45 108 aaKnown RBP13.99□□□□□ -0.17
SNRPB-201ENST00000381342 TIMM10BQ9Y5J6 103 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 COMMD3-BMI1R4GMX3 469 aa13.99□□□□□ -0.17
SNRPB-201ENST00000381342 PRKYO43930 277 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 PEX2P28328 305 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 RPS27P42677 84 aaKnown RBP13.98□□□□□ -0.17
SNRPB-201ENST00000381342 RAD23AP54725 363 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 HGFACQ04756 655 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 SCRN3Q0VDG4 424 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 LRRC36Q1X8D7 754 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 TBC1D28Q2M2D7 210 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 LINC01590Q5TEZ4 76 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 LPCAT4Q643R3 524 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 KRT80Q6KB66 452 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 PRSS57Q6UWY2 283 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 ZBTB49Q6ZSB9 765 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 CXXC5Q7LFL8 322 aaKnown RBP13.98□□□□□ -0.17
SNRPB-201ENST00000381342 SYT9Q86SS6 491 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 ZNF511Q8NB15 262 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 WFDC11Q8NEX6 87 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 PTP4A1Q93096 173 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 TRMT61AQ96FX7 289 aaKnown RBP13.98□□□□□ -0.17
SNRPB-201ENST00000381342 PERPQ96FX8 193 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 MBOAT4Q96T53 435 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 C1orf198Q9H425 327 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 CDH20Q9HBT6 801 aa13.98□□□□□ -0.17
SNRPB-201ENST00000381342 LOC100509620A0A075B734 347 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 RER1O15258 196 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 SGCEO43556 437 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 SNAP29O95721 258 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 PTHP01270 115 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 ZNF35P13682 527 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 STOMP27105 288 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 FMO3P31513 532 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 APLNRP35414 380 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 HTR5AP47898 357 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 SNTB2Q13425 540 aaKnown RBP13.97□□□□□ -0.17
SNRPB-201ENST00000381342 RIPK1Q13546 671 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 KLHL12Q53G59 568 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 Q5PR19 223 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 SLC18B1Q6NT16 456 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 VHLLQ6RSH7 139 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 CFAP77Q6ZQR2 320 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 VASH1Q7L8A9 365 aaPredicted RBP13.97□□□□□ -0.17
SNRPB-201ENST00000381342 TCEANCQ8N8B7 351 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 IL17RDQ8NFM7 739 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 ZMYND19Q96E35 227 aaPredicted RBP13.97□□□□□ -0.17
SNRPB-201ENST00000381342 WACQ9BTA9 647 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 OR51B6Q9H340 312 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 TOR3AQ9H497 397 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 WDR76Q9H967 626 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 FAIMQ9NVQ4 179 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 PLEK2Q9NYT0 353 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 LAMP3Q9UQV4 416 aa13.97□□□□□ -0.17
SNRPB-201ENST00000381342 C5orf49A4QMS7 147 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 GPRIN2O60269 458 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 GLCEO94923 617 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 SOD3P08294 240 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 SPARCP09486 303 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 ZNF823P16415 610 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 CCNOP22674 350 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 SLC2A5P22732 501 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 GGT2P36268 569 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 RPS7P62081 194 aaKnown RBP13.96□□□□□ -0.17
SNRPB-201ENST00000381342 APOFQ13790 326 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 CCDC92Q53HC0 331 aaPredicted RBP13.96□□□□□ -0.17
SNRPB-201ENST00000381342 BCDIN3DQ7Z5W3 292 aaKnown RBP13.96□□□□□ -0.17
SNRPB-201ENST00000381342 ALDH16A1Q8IZ83 802 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 NUP37Q8NFH4 326 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 OR4F15Q8NGB8 312 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 SMAP2Q8WU79 429 aaPredicted RBP13.96□□□□□ -0.17
SNRPB-201ENST00000381342 POM121L2Q96KW2 1035 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 IL4I1Q96RQ9 567 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 DHRS9Q9BPW9 319 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 GSX2Q9BZM3 304 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 GRIP2Q9C0E4 1043 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 CA10Q9NS85 328 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 CYB5R1Q9UHQ9 305 aa13.96□□□□□ -0.17
SNRPB-201ENST00000381342 GDF2Q9UK05 429 aaPredicted RBP13.96□□□□□ -0.17
SNRPB-201ENST00000381342 CCDC182A6NF36 153 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 PRODHO43272 600 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms