RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 F2RL1P55085 397 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 ACTBP60709 375 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 ACTG1P63261 375 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 DMRTC1Q5HYR2 192 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 KIRREL2Q6UWL6 708 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 C5orf46Q6UWT4 87 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 ABHD13Q7L211 337 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 PRSS41Q7RTY9 318 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 RNF141Q8WVD5 230 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 FAM117AQ9C073 453 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 ZNF275Q9NSD4 429 aaPredicted RBP12.51□□□□□ -0.41
SDC1-202ENST00000381150 A6NLC8 198 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 DCTN6O00399 190 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 SOX1O00570 391 aaPredicted RBP12.51□□□□□ -0.41
SDC1-202ENST00000381150 CEP290O15078 2479 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 EIF4E2O60573 245 aaKnown RBP12.51□□□□□ -0.41
SDC1-202ENST00000381150 OR6A2O95222 327 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 APBB3O95704 486 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 WNT11O96014 354 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 IFNA4P05014 189 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 CD2P06729 351 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 SFTA3P0C7M3 94 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 CDKN2AP42771 156 aaKnown RBP12.51□□□□□ -0.41
SDC1-202ENST00000381150 EBPQ15125 230 aaKnown RBP12.51□□□□□ -0.41
SDC1-202ENST00000381150 BAP18Q8IXM2 172 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 SEMA6DQ8NFY4 1073 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 WDR92Q96MX6 357 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 SULT4A1Q9BR01 284 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 LAT2Q9GZY6 243 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 SEMA6CQ9H3T2 930 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 SRMSQ9H3Y6 488 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 MRM2Q9UI43 246 aaKnown RBP12.51□□□□□ -0.41
SDC1-202ENST00000381150 KCNK7Q9Y2U2 307 aa12.51□□□□□ -0.41
SDC1-202ENST00000381150 ZNF749O43361 778 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 ERCC1P07992 297 aaPredicted RBP12.5□□□□□ -0.41
SDC1-202ENST00000381150 SLC35G6P0C7Q6 338 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 NME1P15531 152 aaKnown RBP12.5□□□□□ -0.41
SDC1-202ENST00000381150 MUC1P15941 1255 aaPredicted RBP12.5□□□□□ -0.41
SDC1-202ENST00000381150 ABCD3P28288 659 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 PDZD11Q5EBL8 140 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 SLC2A12Q8TD20 617 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 CD300LFQ8TDQ1 290 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 CCDC74AQ96AQ1 378 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 PHB2Q99623 299 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 ZNF251Q9BRH9 671 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 PQLC2LA1A4F0 135 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 SERPINF1P36955 418 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 KIR2DS3Q14952 304 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 ANKRD16Q6P6B7 361 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 PARGQ86W56 976 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 OR5AP2Q8NGF4 316 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 NUDCD2Q8WVJ2 157 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 CELSR3Q9NYQ7 3312 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 OIP5O43482 229 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 SRPX2O60687 465 aaPredicted RBP12.5□□□□□ -0.41
SDC1-202ENST00000381150 AGR2O95994 175 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 ARG1P05089 322 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 ACTR1BP42025 376 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 GRK6P43250 576 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 ACTR1AP61163 376 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 TMEM31Q5JXX7 168 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 ACER2Q5QJU3 275 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 CLEC1AQ8NC01 280 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 NPEPL1Q8NDH3 523 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 OR4A4PQ8NGN8 299 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 METTL8Q9H825 291 aaKnown RBP12.5□□□□□ -0.41
SDC1-202ENST00000381150 HAO2Q9NYQ3 351 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 ETV7Q9Y603 341 aa12.5□□□□□ -0.41
SDC1-202ENST00000381150 TNFRSF10CO14798 259 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 SFTPBP07988 381 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 SPARCP09486 303 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 FAM53BQ14153 422 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 HABP2Q14520 560 aaPredicted RBP12.49□□□□□ -0.41
SDC1-202ENST00000381150 MOGAT2Q3SYC2 334 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 ZNF704Q6ZNC4 412 aaPredicted RBP12.49□□□□□ -0.41
SDC1-202ENST00000381150 BIVMQ86UB2 503 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 OR2G2Q8NGZ5 317 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 ZNF417Q8TAU3 575 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 SLC22A18Q96BI1 424 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 CHRNA9Q9UGM1 479 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 DAPP1Q9UN19 280 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 MRPS33Q9Y291 106 aaKnown RBP12.49□□□□□ -0.41
SDC1-202ENST00000381150 HPGDP15428 266 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 ALG11Q2TAA5 492 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 UNQ9370/PRO34162Q6UXP9 181 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 MAP3K3Q99759 626 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 SULT2B1O00204 365 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 B3GALT2O43825 422 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 FGF17O60258 216 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 LRP3O75074 770 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 ADAP1O75689 374 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 GNALP38405 381 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 ZNF616Q08AN1 781 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 MPPED2Q15777 294 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 FHL5Q5TD97 284 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 DHRS7BQ6IAN0 325 aaPredicted RBP12.49□□□□□ -0.41
SDC1-202ENST00000381150 UQCC3Q6UW78 93 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 USP53Q70EK8 1073 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 LURAP1LQ8IV03 231 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms