RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 KLHL21Q9UJP4 597 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 A8MXK9 166 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 TRAPPC2LH3BP13 241 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 SLC22A2O15244 555 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 ABHD16AO95870 558 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 COX4I1P13073 169 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 CPT2P23786 658 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 LAP3P28838 519 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 FMODQ06828 376 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 CDK5R2Q13319 367 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 CYLC2Q14093 348 aaPredicted RBP13.48□□□□□ -0.25
VCX3A-201ENST00000381089 ALG10Q5BKT4 473 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 TMEM255AQ5JRV8 349 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 KLF17Q5JT82 389 aaPredicted RBP13.48□□□□□ -0.25
VCX3A-201ENST00000381089 FAM205BPQ63HN1 556 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 SLC25A47Q6Q0C1 308 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 BTNL3Q6UXE8 466 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 LRRC28Q86X40 367 aaPredicted RBP13.48□□□□□ -0.25
VCX3A-201ENST00000381089 ZNF283Q8N7M2 679 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 OR2Z1Q8NG97 314 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 OR52E2Q8NGJ4 325 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 PFN4Q8NHR9 129 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 TMEM239Q8WW34 195 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 HDAC2Q92769 488 aaKnown RBP13.48□□□□□ -0.25
VCX3A-201ENST00000381089 TAMM41Q96BW9 452 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 WNT5BQ9H1J7 359 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 IL20RAQ9UHF4 553 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 PPP1R3CQ9UQK1 317 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 LRCH1Q9Y2L9 728 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 MED31Q9Y3C7 131 aa13.48□□□□□ -0.25
VCX3A-201ENST00000381089 C12orf71A8MTZ7 269 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 IFNL4K9M1U5 179 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 FBP2O00757 339 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 MRASO14807 208 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 OR5F1O95221 314 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 NGFP01138 241 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 PPIAL4GP0DN37 164 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 MDH2P40926 338 aaKnown RBP13.47□□□□□ -0.25
VCX3A-201ENST00000381089 PSG7Q13046 419 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 TOP3AQ13472 1001 aaPredicted RBP13.47□□□□□ -0.25
VCX3A-201ENST00000381089 NFYCQ13952 458 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 MIDNQ504T8 468 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 SYT9Q86SS6 491 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 TSPYL5Q86VY4 417 aaPredicted RBP13.47□□□□□ -0.25
VCX3A-201ENST00000381089 BCL6BQ8N143 479 aaPredicted RBP13.47□□□□□ -0.25
VCX3A-201ENST00000381089 DPP10Q8N608 796 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 MOSPD2Q8NHP6 518 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 TMEM255BQ8WV15 326 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 LIPHQ8WWY8 451 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 RCN3Q96D15 328 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 NMD3Q96D46 503 aaKnown RBP13.47□□□□□ -0.25
VCX3A-201ENST00000381089 COG8Q96MW5 612 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 WACQ9BTA9 647 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 KAT8Q9H7Z6 458 aaKnown RBP13.47□□□□□ -0.25
VCX3A-201ENST00000381089 IL19Q9UHD0 177 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 BAG5Q9UL15 447 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 SH3GLB1Q9Y371 365 aa13.47□□□□□ -0.25
VCX3A-201ENST00000381089 TGP01266 2768 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 IGKV1D-43A0A0B4J1Z2 117 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 A0A1W2PPL8 197 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 HTR3EA5X5Y0 456 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 TSPAN19P0C672 248 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 MSR1P21757 451 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 RPL27P61353 136 aaKnown RBP13.46□□□□□ -0.25
VCX3A-201ENST00000381089 SELPLGQ14242 412 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 SLC9A3R2Q15599 337 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 VMACQ2NL98 169 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 ZNF774Q6NX45 483 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 LEG1Q6P5S2 330 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 LRRN1Q6UXK5 716 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 NKAIN4Q8IVV8 208 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 PARP8Q8N3A8 854 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 FITM2Q8N6M3 262 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 OR10A6Q8NH74 314 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 TSPEARQ8WU66 669 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 C1orf147Q96MC9 270 aaPredicted RBP13.46□□□□□ -0.25
VCX3A-201ENST00000381089 ZNF48Q96MX3 618 aaPredicted RBP13.46□□□□□ -0.25
VCX3A-201ENST00000381089 C20orf141Q9NUB4 165 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 ARL8BQ9NVJ2 186 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 TBCCD1Q9NVR7 557 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 DCAF16Q9NXF7 216 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 RIMS3Q9UJD0 308 aa13.46□□□□□ -0.25
VCX3A-201ENST00000381089 A0A1B0GUS0 222 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 A6NIZ1 184 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 BBIP1A8MTZ0 92 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 F5H0A9 414 aaPredicted RBP13.45□□□□□ -0.26
VCX3A-201ENST00000381089 IFNA14P01570 189 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 COX5BP10606 129 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 THRBP10828 461 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 IFNA8P32881 189 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 RAP1BP61224 184 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 SEC61A1P61619 476 aaKnown RBP13.45□□□□□ -0.26
VCX3A-201ENST00000381089 RAP1AP62834 184 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 PAX8Q06710 450 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 SCRN3Q0VDG4 424 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 LAPTM4AQ15012 233 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 ZMYND11Q15326 602 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 SPRNQ5BIV9 151 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 C9orf139Q6ZV77 190 aa13.45□□□□□ -0.26
VCX3A-201ENST00000381089 SPATC1Q76KD6 591 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms